Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20435 | 61528;61529;61530 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
N2AB | 18794 | 56605;56606;56607 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
N2A | 17867 | 53824;53825;53826 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
N2B | 11370 | 34333;34334;34335 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
Novex-1 | 11495 | 34708;34709;34710 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
Novex-2 | 11562 | 34909;34910;34911 | chr2:178590422;178590421;178590420 | chr2:179455149;179455148;179455147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.978 | N | 0.599 | 0.327 | 0.327952845175 | gnomAD-4.0.0 | 1.5969E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86507E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1143 | likely_benign | 0.1125 | benign | -0.94 | Destabilizing | 0.978 | D | 0.513 | neutral | N | 0.508648597 | None | None | N |
P/C | 0.6183 | likely_pathogenic | 0.6274 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
P/D | 0.5301 | ambiguous | 0.5171 | ambiguous | -0.429 | Destabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
P/E | 0.3489 | ambiguous | 0.3394 | benign | -0.435 | Destabilizing | 0.983 | D | 0.551 | neutral | None | None | None | None | N |
P/F | 0.6881 | likely_pathogenic | 0.6735 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
P/G | 0.3629 | ambiguous | 0.3612 | ambiguous | -1.201 | Destabilizing | 0.992 | D | 0.623 | neutral | None | None | None | None | N |
P/H | 0.2768 | likely_benign | 0.2764 | benign | -0.501 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.501722625 | None | None | N |
P/I | 0.4787 | ambiguous | 0.4454 | ambiguous | -0.343 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
P/K | 0.3468 | ambiguous | 0.3307 | benign | -0.753 | Destabilizing | 0.246 | N | 0.314 | neutral | None | None | None | None | N |
P/L | 0.1981 | likely_benign | 0.1909 | benign | -0.343 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | N | 0.502069341 | None | None | N |
P/M | 0.4353 | ambiguous | 0.4231 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
P/N | 0.3932 | ambiguous | 0.3948 | ambiguous | -0.665 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/Q | 0.2219 | likely_benign | 0.2213 | benign | -0.761 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | N |
P/R | 0.2656 | likely_benign | 0.2551 | benign | -0.304 | Destabilizing | 0.987 | D | 0.653 | neutral | N | 0.484251585 | None | None | N |
P/S | 0.1583 | likely_benign | 0.1563 | benign | -1.175 | Destabilizing | 0.978 | D | 0.599 | neutral | N | 0.450984373 | None | None | N |
P/T | 0.1208 | likely_benign | 0.1127 | benign | -1.055 | Destabilizing | 0.989 | D | 0.631 | neutral | N | 0.419506673 | None | None | N |
P/V | 0.3243 | likely_benign | 0.2984 | benign | -0.507 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
P/W | 0.768 | likely_pathogenic | 0.7543 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/Y | 0.6328 | likely_pathogenic | 0.6094 | pathogenic | -0.516 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.