Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20442 | 61549;61550;61551 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
N2AB | 18801 | 56626;56627;56628 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
N2A | 17874 | 53845;53846;53847 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
N2B | 11377 | 34354;34355;34356 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
Novex-1 | 11502 | 34729;34730;34731 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
Novex-2 | 11569 | 34930;34931;34932 | chr2:178590401;178590400;178590399 | chr2:179455128;179455127;179455126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs751412533 | None | 0.999 | N | 0.563 | 0.316 | 0.475112344478 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs751412533 | None | 0.999 | N | 0.563 | 0.316 | 0.475112344478 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94326E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2557 | likely_benign | 0.2137 | benign | -0.921 | Destabilizing | 0.4 | N | 0.301 | neutral | D | 0.523311405 | None | None | N |
E/C | 0.8964 | likely_pathogenic | 0.8803 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2477 | likely_benign | 0.248 | benign | -0.859 | Destabilizing | 0.99 | D | 0.483 | neutral | N | 0.518654947 | None | None | N |
E/F | 0.8833 | likely_pathogenic | 0.8543 | pathogenic | -0.167 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
E/G | 0.4155 | ambiguous | 0.3264 | benign | -1.288 | Destabilizing | 0.98 | D | 0.641 | neutral | N | 0.484032218 | None | None | N |
E/H | 0.6519 | likely_pathogenic | 0.6061 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
E/I | 0.4556 | ambiguous | 0.4283 | ambiguous | 0.086 | Stabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
E/K | 0.3096 | likely_benign | 0.2301 | benign | -0.442 | Destabilizing | 0.99 | D | 0.504 | neutral | N | 0.511419543 | None | None | N |
E/L | 0.5947 | likely_pathogenic | 0.5494 | ambiguous | 0.086 | Stabilizing | 0.985 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/M | 0.6188 | likely_pathogenic | 0.5793 | pathogenic | 0.452 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/N | 0.4187 | ambiguous | 0.4076 | ambiguous | -1.025 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.7065 | likely_pathogenic | 0.6284 | pathogenic | -0.229 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
E/Q | 0.2154 | likely_benign | 0.19 | benign | -0.881 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.5113049 | None | None | N |
E/R | 0.476 | ambiguous | 0.3714 | ambiguous | -0.114 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
E/S | 0.3287 | likely_benign | 0.299 | benign | -1.33 | Destabilizing | 0.971 | D | 0.515 | neutral | None | None | None | None | N |
E/T | 0.2746 | likely_benign | 0.2522 | benign | -1.015 | Destabilizing | 0.469 | N | 0.287 | neutral | None | None | None | None | N |
E/V | 0.2924 | likely_benign | 0.2661 | benign | -0.229 | Destabilizing | 0.98 | D | 0.67 | neutral | N | 0.470131471 | None | None | N |
E/W | 0.9604 | likely_pathogenic | 0.9437 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.7944 | likely_pathogenic | 0.7565 | pathogenic | 0.119 | Stabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.