Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20444 | 61555;61556;61557 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
N2AB | 18803 | 56632;56633;56634 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
N2A | 17876 | 53851;53852;53853 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
N2B | 11379 | 34360;34361;34362 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
Novex-1 | 11504 | 34735;34736;34737 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
Novex-2 | 11571 | 34936;34937;34938 | chr2:178590395;178590394;178590393 | chr2:179455122;179455121;179455120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs758056865 | -2.1 | 0.811 | N | 0.549 | 0.238 | 0.307016933798 | gnomAD-2.1.1 | 4.19E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.2E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5475 | ambiguous | 0.5138 | ambiguous | -1.461 | Destabilizing | 0.132 | N | 0.351 | neutral | None | None | None | None | N |
R/C | 0.1671 | likely_benign | 0.1599 | benign | -1.454 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
R/D | 0.8517 | likely_pathogenic | 0.8175 | pathogenic | -0.326 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | N |
R/E | 0.5917 | likely_pathogenic | 0.5408 | ambiguous | -0.148 | Destabilizing | 0.851 | D | 0.559 | neutral | None | None | None | None | N |
R/F | 0.599 | likely_pathogenic | 0.557 | ambiguous | -0.97 | Destabilizing | 0.996 | D | 0.732 | prob.delet. | None | None | None | None | N |
R/G | 0.4874 | ambiguous | 0.4296 | ambiguous | -1.817 | Destabilizing | 0.896 | D | 0.576 | neutral | N | 0.487346672 | None | None | N |
R/H | 0.1077 | likely_benign | 0.1043 | benign | -1.823 | Destabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | N |
R/I | 0.2713 | likely_benign | 0.2484 | benign | -0.465 | Destabilizing | 0.984 | D | 0.719 | prob.delet. | N | 0.492737782 | None | None | N |
R/K | 0.1153 | likely_benign | 0.1068 | benign | -1.231 | Destabilizing | 0.011 | N | 0.281 | neutral | N | 0.439268657 | None | None | N |
R/L | 0.2593 | likely_benign | 0.2496 | benign | -0.465 | Destabilizing | 0.919 | D | 0.565 | neutral | None | None | None | None | N |
R/M | 0.3382 | likely_benign | 0.3158 | benign | -0.873 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
R/N | 0.6607 | likely_pathogenic | 0.6124 | pathogenic | -0.847 | Destabilizing | 0.976 | D | 0.583 | neutral | None | None | None | None | N |
R/P | 0.9561 | likely_pathogenic | 0.9425 | pathogenic | -0.78 | Destabilizing | 0.988 | D | 0.69 | prob.neutral | None | None | None | None | N |
R/Q | 0.124 | likely_benign | 0.1196 | benign | -0.918 | Destabilizing | 0.976 | D | 0.612 | neutral | None | None | None | None | N |
R/S | 0.5717 | likely_pathogenic | 0.5346 | ambiguous | -1.803 | Destabilizing | 0.811 | D | 0.549 | neutral | N | 0.491004199 | None | None | N |
R/T | 0.2913 | likely_benign | 0.2673 | benign | -1.412 | Destabilizing | 0.896 | D | 0.528 | neutral | N | 0.479728413 | None | None | N |
R/V | 0.3519 | ambiguous | 0.3381 | benign | -0.78 | Destabilizing | 0.976 | D | 0.633 | neutral | None | None | None | None | N |
R/W | 0.2376 | likely_benign | 0.2195 | benign | -0.446 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
R/Y | 0.452 | ambiguous | 0.4086 | ambiguous | -0.247 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.