Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20465 | 61618;61619;61620 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
N2AB | 18824 | 56695;56696;56697 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
N2A | 17897 | 53914;53915;53916 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
N2B | 11400 | 34423;34424;34425 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
Novex-1 | 11525 | 34798;34799;34800 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
Novex-2 | 11592 | 34999;35000;35001 | chr2:178590332;178590331;178590330 | chr2:179455059;179455058;179455057 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1358181606 | None | 0.999 | N | 0.721 | 0.294 | 0.267755039894 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 9.59693E-04 |
V/M | rs1358181606 | None | 0.999 | N | 0.721 | 0.294 | 0.267755039894 | gnomAD-4.0.0 | 2.63071E-05 | None | None | None | None | N | None | 0 | 6.56254E-05 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 9.59693E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5956 | likely_pathogenic | 0.4808 | ambiguous | -1.601 | Destabilizing | 0.996 | D | 0.555 | neutral | N | 0.480735356 | None | None | N |
V/C | 0.8876 | likely_pathogenic | 0.8555 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/D | 0.9673 | likely_pathogenic | 0.8942 | pathogenic | -1.739 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/E | 0.9209 | likely_pathogenic | 0.8159 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.482509783 | None | None | N |
V/F | 0.4898 | ambiguous | 0.3332 | benign | -0.882 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/G | 0.805 | likely_pathogenic | 0.6509 | pathogenic | -2.123 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | N | 0.482509783 | None | None | N |
V/H | 0.9698 | likely_pathogenic | 0.9262 | pathogenic | -1.72 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/I | 0.0877 | likely_benign | 0.09 | benign | -0.16 | Destabilizing | 0.668 | D | 0.245 | neutral | None | None | None | None | N |
V/K | 0.9535 | likely_pathogenic | 0.8812 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/L | 0.4551 | ambiguous | 0.3524 | ambiguous | -0.16 | Destabilizing | 0.959 | D | 0.583 | neutral | N | 0.512677832 | None | None | N |
V/M | 0.3856 | ambiguous | 0.3038 | benign | -0.216 | Destabilizing | 0.999 | D | 0.721 | deleterious | N | 0.482509783 | None | None | N |
V/N | 0.9162 | likely_pathogenic | 0.8218 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
V/P | 0.9637 | likely_pathogenic | 0.9234 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.9106 | likely_pathogenic | 0.825 | pathogenic | -1.35 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/R | 0.9376 | likely_pathogenic | 0.85 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/S | 0.8329 | likely_pathogenic | 0.7004 | pathogenic | -2.193 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/T | 0.5973 | likely_pathogenic | 0.482 | ambiguous | -1.811 | Destabilizing | 0.997 | D | 0.611 | neutral | None | None | None | None | N |
V/W | 0.9808 | likely_pathogenic | 0.9514 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/Y | 0.9195 | likely_pathogenic | 0.8314 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.