Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20481 | 61666;61667;61668 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
N2AB | 18840 | 56743;56744;56745 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
N2A | 17913 | 53962;53963;53964 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
N2B | 11416 | 34471;34472;34473 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
Novex-1 | 11541 | 34846;34847;34848 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
Novex-2 | 11608 | 35047;35048;35049 | chr2:178590284;178590283;178590282 | chr2:179455011;179455010;179455009 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.885 | N | 0.508 | 0.066 | 0.208816687407 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1085 | likely_benign | 0.1258 | benign | -0.258 | Destabilizing | 0.02 | N | 0.254 | neutral | N | 0.437929357 | None | None | N |
T/C | 0.5371 | ambiguous | 0.5905 | pathogenic | -0.246 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/D | 0.6096 | likely_pathogenic | 0.6504 | pathogenic | 0.201 | Stabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/E | 0.5549 | ambiguous | 0.6089 | pathogenic | 0.127 | Stabilizing | 0.986 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/F | 0.4612 | ambiguous | 0.5106 | ambiguous | -0.761 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/G | 0.27 | likely_benign | 0.3063 | benign | -0.379 | Destabilizing | 0.91 | D | 0.592 | neutral | None | None | None | None | N |
T/H | 0.4428 | ambiguous | 0.4757 | ambiguous | -0.547 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/I | 0.463 | ambiguous | 0.5113 | ambiguous | -0.058 | Destabilizing | 0.982 | D | 0.717 | prob.delet. | N | 0.500055252 | None | None | N |
T/K | 0.5319 | ambiguous | 0.554 | ambiguous | -0.309 | Destabilizing | 0.986 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/L | 0.189 | likely_benign | 0.2191 | benign | -0.058 | Destabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | N |
T/M | 0.1561 | likely_benign | 0.1762 | benign | -0.048 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/N | 0.1718 | likely_benign | 0.2091 | benign | -0.069 | Destabilizing | 0.991 | D | 0.644 | neutral | N | 0.425789566 | None | None | N |
T/P | 0.3752 | ambiguous | 0.379 | ambiguous | -0.096 | Destabilizing | 0.991 | D | 0.716 | prob.delet. | N | 0.500922043 | None | None | N |
T/Q | 0.3856 | ambiguous | 0.4216 | ambiguous | -0.267 | Destabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/R | 0.445 | ambiguous | 0.4573 | ambiguous | -0.006 | Destabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/S | 0.1198 | likely_benign | 0.1407 | benign | -0.278 | Destabilizing | 0.885 | D | 0.508 | neutral | N | 0.437582641 | None | None | N |
T/V | 0.3241 | likely_benign | 0.3702 | ambiguous | -0.096 | Destabilizing | 0.91 | D | 0.509 | neutral | None | None | None | None | N |
T/W | 0.7961 | likely_pathogenic | 0.8084 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/Y | 0.4978 | ambiguous | 0.5462 | ambiguous | -0.512 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.