Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20508 | 61747;61748;61749 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
N2AB | 18867 | 56824;56825;56826 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
N2A | 17940 | 54043;54044;54045 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
N2B | 11443 | 34552;34553;34554 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
Novex-1 | 11568 | 34927;34928;34929 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
Novex-2 | 11635 | 35128;35129;35130 | chr2:178590203;178590202;178590201 | chr2:179454930;179454929;179454928 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.046 | N | 0.211 | 0.088 | 0.382925413656 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.704 | likely_pathogenic | 0.7623 | pathogenic | -2.17 | Highly Destabilizing | 0.825 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/C | 0.7166 | likely_pathogenic | 0.742 | pathogenic | -1.428 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/D | 0.9741 | likely_pathogenic | 0.9836 | pathogenic | -1.682 | Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | I |
I/E | 0.9409 | likely_pathogenic | 0.9585 | pathogenic | -1.597 | Destabilizing | 0.988 | D | 0.853 | deleterious | None | None | None | None | I |
I/F | 0.2677 | likely_benign | 0.2924 | benign | -1.466 | Destabilizing | 0.976 | D | 0.7 | prob.neutral | None | None | None | None | I |
I/G | 0.9318 | likely_pathogenic | 0.9547 | pathogenic | -2.583 | Highly Destabilizing | 0.988 | D | 0.84 | deleterious | None | None | None | None | I |
I/H | 0.8721 | likely_pathogenic | 0.9065 | pathogenic | -1.737 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
I/K | 0.8193 | likely_pathogenic | 0.859 | pathogenic | -1.571 | Destabilizing | 0.984 | D | 0.851 | deleterious | D | 0.53148467 | None | None | I |
I/L | 0.178 | likely_benign | 0.1898 | benign | -1.052 | Destabilizing | 0.211 | N | 0.458 | neutral | D | 0.526099073 | None | None | I |
I/M | 0.1563 | likely_benign | 0.1615 | benign | -0.872 | Destabilizing | 0.64 | D | 0.51 | neutral | D | 0.53097769 | None | None | I |
I/N | 0.7563 | likely_pathogenic | 0.8186 | pathogenic | -1.493 | Destabilizing | 0.996 | D | 0.85 | deleterious | None | None | None | None | I |
I/P | 0.9574 | likely_pathogenic | 0.9694 | pathogenic | -1.398 | Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | I |
I/Q | 0.8618 | likely_pathogenic | 0.8941 | pathogenic | -1.559 | Destabilizing | 0.988 | D | 0.849 | deleterious | None | None | None | None | I |
I/R | 0.7668 | likely_pathogenic | 0.8241 | pathogenic | -1.05 | Destabilizing | 0.984 | D | 0.851 | deleterious | D | 0.542840975 | None | None | I |
I/S | 0.7269 | likely_pathogenic | 0.7983 | pathogenic | -2.173 | Highly Destabilizing | 0.988 | D | 0.839 | deleterious | None | None | None | None | I |
I/T | 0.5387 | ambiguous | 0.604 | pathogenic | -1.946 | Destabilizing | 0.896 | D | 0.771 | deleterious | N | 0.510240089 | None | None | I |
I/V | 0.0889 | likely_benign | 0.0839 | benign | -1.398 | Destabilizing | 0.046 | N | 0.211 | neutral | N | 0.42563293 | None | None | I |
I/W | 0.9149 | likely_pathogenic | 0.9237 | pathogenic | -1.569 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | I |
I/Y | 0.7096 | likely_pathogenic | 0.7458 | pathogenic | -1.365 | Destabilizing | 0.988 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.