Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20513 | 61762;61763;61764 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
N2AB | 18872 | 56839;56840;56841 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
N2A | 17945 | 54058;54059;54060 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
N2B | 11448 | 34567;34568;34569 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
Novex-1 | 11573 | 34942;34943;34944 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
Novex-2 | 11640 | 35143;35144;35145 | chr2:178590188;178590187;178590186 | chr2:179454915;179454914;179454913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.811 | N | 0.494 | 0.204 | 0.230578612272 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2067 | likely_benign | 0.2318 | benign | -0.2 | Destabilizing | 0.811 | D | 0.503 | neutral | N | 0.474871592 | None | None | I |
E/C | 0.8618 | likely_pathogenic | 0.8795 | pathogenic | -0.004 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
E/D | 0.0679 | likely_benign | 0.0747 | benign | -0.151 | Destabilizing | 0.011 | N | 0.198 | neutral | N | 0.365794326 | None | None | I |
E/F | 0.8569 | likely_pathogenic | 0.8916 | pathogenic | -0.069 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | I |
E/G | 0.137 | likely_benign | 0.1618 | benign | -0.373 | Destabilizing | 0.026 | N | 0.366 | neutral | N | 0.432848825 | None | None | I |
E/H | 0.6737 | likely_pathogenic | 0.7198 | pathogenic | 0.253 | Stabilizing | 0.988 | D | 0.421 | neutral | None | None | None | None | I |
E/I | 0.6924 | likely_pathogenic | 0.7507 | pathogenic | 0.215 | Stabilizing | 0.988 | D | 0.607 | neutral | None | None | None | None | I |
E/K | 0.4305 | ambiguous | 0.5052 | ambiguous | 0.531 | Stabilizing | 0.811 | D | 0.494 | neutral | N | 0.482875 | None | None | I |
E/L | 0.6086 | likely_pathogenic | 0.6574 | pathogenic | 0.215 | Stabilizing | 0.976 | D | 0.581 | neutral | None | None | None | None | I |
E/M | 0.6898 | likely_pathogenic | 0.7237 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
E/N | 0.2112 | likely_benign | 0.2523 | benign | 0.155 | Stabilizing | 0.851 | D | 0.455 | neutral | None | None | None | None | I |
E/P | 0.885 | likely_pathogenic | 0.8883 | pathogenic | 0.097 | Stabilizing | 0.988 | D | 0.514 | neutral | None | None | None | None | I |
E/Q | 0.2695 | likely_benign | 0.2953 | benign | 0.209 | Stabilizing | 0.437 | N | 0.247 | neutral | N | 0.499017889 | None | None | I |
E/R | 0.5402 | ambiguous | 0.5897 | pathogenic | 0.693 | Stabilizing | 0.976 | D | 0.425 | neutral | None | None | None | None | I |
E/S | 0.2511 | likely_benign | 0.2914 | benign | 0.021 | Stabilizing | 0.919 | D | 0.457 | neutral | None | None | None | None | I |
E/T | 0.4188 | ambiguous | 0.4844 | ambiguous | 0.175 | Stabilizing | 0.919 | D | 0.518 | neutral | None | None | None | None | I |
E/V | 0.4692 | ambiguous | 0.524 | ambiguous | 0.097 | Stabilizing | 0.984 | D | 0.549 | neutral | N | 0.491726557 | None | None | I |
E/W | 0.9436 | likely_pathogenic | 0.9528 | pathogenic | 0.062 | Stabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
E/Y | 0.6882 | likely_pathogenic | 0.7487 | pathogenic | 0.174 | Stabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.