Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20533 | 61822;61823;61824 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
N2AB | 18892 | 56899;56900;56901 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
N2A | 17965 | 54118;54119;54120 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
N2B | 11468 | 34627;34628;34629 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
Novex-1 | 11593 | 35002;35003;35004 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
Novex-2 | 11660 | 35203;35204;35205 | chr2:178590128;178590127;178590126 | chr2:179454855;179454854;179454853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs970448292 | -1.269 | 0.669 | N | 0.51 | 0.278 | 0.251116650651 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs970448292 | -1.269 | 0.669 | N | 0.51 | 0.278 | 0.251116650651 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs970448292 | -1.269 | 0.669 | N | 0.51 | 0.278 | 0.251116650651 | gnomAD-4.0.0 | 1.23986E-06 | None | None | None | None | N | None | 2.67187E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs970448292 | None | 0.136 | N | 0.386 | 0.252 | 0.20549828249 | gnomAD-4.0.0 | 1.36886E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9968E-07 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3015 | likely_benign | 0.3372 | benign | -0.889 | Destabilizing | 0.454 | N | 0.458 | neutral | N | 0.479763777 | None | None | N |
E/C | 0.8799 | likely_pathogenic | 0.881 | pathogenic | -0.577 | Destabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | N |
E/D | 0.3465 | ambiguous | 0.3739 | ambiguous | -1.679 | Destabilizing | 0.012 | N | 0.201 | neutral | N | 0.514492426 | None | None | N |
E/F | 0.8457 | likely_pathogenic | 0.8638 | pathogenic | -0.35 | Destabilizing | 0.974 | D | 0.639 | neutral | None | None | None | None | N |
E/G | 0.4784 | ambiguous | 0.5441 | ambiguous | -1.336 | Destabilizing | 0.012 | N | 0.4 | neutral | N | 0.493117076 | None | None | N |
E/H | 0.6529 | likely_pathogenic | 0.698 | pathogenic | -0.619 | Destabilizing | 0.016 | N | 0.241 | neutral | None | None | None | None | N |
E/I | 0.5333 | ambiguous | 0.5443 | ambiguous | 0.373 | Stabilizing | 0.974 | D | 0.615 | neutral | None | None | None | None | N |
E/K | 0.5587 | ambiguous | 0.6416 | pathogenic | -1.301 | Destabilizing | 0.669 | D | 0.51 | neutral | N | 0.487959186 | None | None | N |
E/L | 0.6494 | likely_pathogenic | 0.6762 | pathogenic | 0.373 | Stabilizing | 0.842 | D | 0.583 | neutral | None | None | None | None | N |
E/M | 0.626 | likely_pathogenic | 0.6429 | pathogenic | 1.003 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
E/N | 0.5619 | ambiguous | 0.6297 | pathogenic | -1.701 | Destabilizing | 0.728 | D | 0.483 | neutral | None | None | None | None | N |
E/P | 0.9892 | likely_pathogenic | 0.9893 | pathogenic | -0.028 | Destabilizing | 0.974 | D | 0.536 | neutral | None | None | None | None | N |
E/Q | 0.2431 | likely_benign | 0.2951 | benign | -1.386 | Destabilizing | 0.136 | N | 0.386 | neutral | N | 0.455790839 | None | None | N |
E/R | 0.6444 | likely_pathogenic | 0.7212 | pathogenic | -1.135 | Destabilizing | 0.842 | D | 0.511 | neutral | None | None | None | None | N |
E/S | 0.3424 | ambiguous | 0.3846 | ambiguous | -2.242 | Highly Destabilizing | 0.688 | D | 0.471 | neutral | None | None | None | None | N |
E/T | 0.4028 | ambiguous | 0.4448 | ambiguous | -1.843 | Destabilizing | 0.915 | D | 0.499 | neutral | None | None | None | None | N |
E/V | 0.3502 | ambiguous | 0.3705 | ambiguous | -0.028 | Destabilizing | 0.891 | D | 0.594 | neutral | N | 0.462775527 | None | None | N |
E/W | 0.9545 | likely_pathogenic | 0.9592 | pathogenic | -0.405 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
E/Y | 0.7927 | likely_pathogenic | 0.8129 | pathogenic | -0.169 | Destabilizing | 0.949 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.