Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20544 | 61855;61856;61857 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
N2AB | 18903 | 56932;56933;56934 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
N2A | 17976 | 54151;54152;54153 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
N2B | 11479 | 34660;34661;34662 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
Novex-1 | 11604 | 35035;35036;35037 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
Novex-2 | 11671 | 35236;35237;35238 | chr2:178590095;178590094;178590093 | chr2:179454822;179454821;179454820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 0.961 | N | 0.59 | 0.41 | 0.548865971634 | gnomAD-4.0.0 | 6.84426E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99672E-07 | 0 | 0 |
H/R | rs876658073 | -0.368 | 0.999 | N | 0.508 | 0.367 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
H/R | rs876658073 | -0.368 | 0.999 | N | 0.508 | 0.367 | None | gnomAD-4.0.0 | 2.7377E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6609 | likely_pathogenic | 0.6082 | pathogenic | -0.171 | Destabilizing | 0.993 | D | 0.564 | neutral | None | None | None | None | I |
H/C | 0.3751 | ambiguous | 0.3343 | benign | 0.68 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
H/D | 0.705 | likely_pathogenic | 0.6819 | pathogenic | -0.053 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.45736692 | None | None | I |
H/E | 0.7821 | likely_pathogenic | 0.7479 | pathogenic | -0.002 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | I |
H/F | 0.5809 | likely_pathogenic | 0.567 | pathogenic | 0.599 | Stabilizing | 0.171 | N | 0.32 | neutral | None | None | None | None | I |
H/G | 0.6488 | likely_pathogenic | 0.6307 | pathogenic | -0.499 | Destabilizing | 0.998 | D | 0.572 | neutral | None | None | None | None | I |
H/I | 0.8687 | likely_pathogenic | 0.829 | pathogenic | 0.699 | Stabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | I |
H/K | 0.7357 | likely_pathogenic | 0.6821 | pathogenic | -0.069 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | I |
H/L | 0.5236 | ambiguous | 0.4804 | ambiguous | 0.699 | Stabilizing | 0.961 | D | 0.59 | neutral | N | 0.50125377 | None | None | I |
H/M | 0.8294 | likely_pathogenic | 0.7883 | pathogenic | 0.617 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
H/N | 0.2985 | likely_benign | 0.284 | benign | 0.09 | Stabilizing | 0.997 | D | 0.47 | neutral | N | 0.45942579 | None | None | I |
H/P | 0.8571 | likely_pathogenic | 0.8409 | pathogenic | 0.434 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | N | 0.49378908 | None | None | I |
H/Q | 0.5018 | ambiguous | 0.4838 | ambiguous | 0.245 | Stabilizing | 0.999 | D | 0.529 | neutral | N | 0.435914212 | None | None | I |
H/R | 0.4169 | ambiguous | 0.3878 | ambiguous | -0.667 | Destabilizing | 0.999 | D | 0.508 | neutral | N | 0.445957848 | None | None | I |
H/S | 0.4511 | ambiguous | 0.4263 | ambiguous | 0.128 | Stabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | I |
H/T | 0.6713 | likely_pathogenic | 0.5952 | pathogenic | 0.273 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
H/V | 0.8006 | likely_pathogenic | 0.7397 | pathogenic | 0.434 | Stabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | I |
H/W | 0.6635 | likely_pathogenic | 0.6543 | pathogenic | 0.68 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
H/Y | 0.2138 | likely_benign | 0.2129 | benign | 0.94 | Stabilizing | 0.961 | D | 0.444 | neutral | N | 0.483188084 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.