Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20550 | 61873;61874;61875 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
N2AB | 18909 | 56950;56951;56952 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
N2A | 17982 | 54169;54170;54171 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
N2B | 11485 | 34678;34679;34680 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
Novex-1 | 11610 | 35053;35054;35055 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
Novex-2 | 11677 | 35254;35255;35256 | chr2:178590077;178590076;178590075 | chr2:179454804;179454803;179454802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2049883330 | None | 0.001 | N | 0.423 | 0.188 | 0.428401797576 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/L | rs2049883330 | None | 0.001 | N | 0.423 | 0.188 | 0.428401797576 | gnomAD-4.0.0 | 6.57704E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47111E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0767 | likely_benign | 0.0805 | benign | -0.564 | Destabilizing | None | N | 0.167 | neutral | N | 0.492268927 | None | None | N |
S/C | 0.1085 | likely_benign | 0.1163 | benign | -0.476 | Destabilizing | 0.901 | D | 0.563 | neutral | None | None | None | None | N |
S/D | 0.5447 | ambiguous | 0.6441 | pathogenic | -1.491 | Destabilizing | 0.561 | D | 0.475 | neutral | None | None | None | None | N |
S/E | 0.5419 | ambiguous | 0.6356 | pathogenic | -1.352 | Destabilizing | 0.345 | N | 0.454 | neutral | None | None | None | None | N |
S/F | 0.1629 | likely_benign | 0.2044 | benign | -0.425 | Destabilizing | 0.818 | D | 0.628 | neutral | None | None | None | None | N |
S/G | 0.1704 | likely_benign | 0.186 | benign | -0.928 | Destabilizing | 0.209 | N | 0.421 | neutral | None | None | None | None | N |
S/H | 0.2872 | likely_benign | 0.3395 | benign | -1.505 | Destabilizing | 0.965 | D | 0.567 | neutral | None | None | None | None | N |
S/I | 0.1345 | likely_benign | 0.1622 | benign | 0.334 | Stabilizing | 0.39 | N | 0.547 | neutral | None | None | None | None | N |
S/K | 0.7128 | likely_pathogenic | 0.8038 | pathogenic | -0.527 | Destabilizing | 0.007 | N | 0.187 | neutral | None | None | None | None | N |
S/L | 0.081 | likely_benign | 0.0954 | benign | 0.334 | Stabilizing | 0.001 | N | 0.423 | neutral | N | 0.448614151 | None | None | N |
S/M | 0.1395 | likely_benign | 0.1548 | benign | 0.364 | Stabilizing | 0.818 | D | 0.567 | neutral | None | None | None | None | N |
S/N | 0.1707 | likely_benign | 0.1993 | benign | -1.062 | Destabilizing | 0.561 | D | 0.487 | neutral | None | None | None | None | N |
S/P | 0.9734 | likely_pathogenic | 0.9815 | pathogenic | 0.07 | Stabilizing | 0.662 | D | 0.537 | neutral | N | 0.485972726 | None | None | N |
S/Q | 0.4766 | ambiguous | 0.5215 | ambiguous | -0.895 | Destabilizing | 0.561 | D | 0.54 | neutral | None | None | None | None | N |
S/R | 0.6354 | likely_pathogenic | 0.7368 | pathogenic | -0.838 | Destabilizing | 0.39 | N | 0.52 | neutral | None | None | None | None | N |
S/T | 0.0686 | likely_benign | 0.0724 | benign | -0.7 | Destabilizing | 0.002 | N | 0.176 | neutral | N | 0.389141773 | None | None | N |
S/V | 0.1428 | likely_benign | 0.1601 | benign | 0.07 | Stabilizing | 0.209 | N | 0.549 | neutral | None | None | None | None | N |
S/W | 0.33 | likely_benign | 0.4106 | ambiguous | -0.745 | Destabilizing | 0.991 | D | 0.634 | neutral | None | None | None | None | N |
S/Y | 0.16 | likely_benign | 0.2001 | benign | -0.309 | Destabilizing | 0.901 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.