Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20563 | 61912;61913;61914 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
N2AB | 18922 | 56989;56990;56991 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
N2A | 17995 | 54208;54209;54210 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
N2B | 11498 | 34717;34718;34719 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
Novex-1 | 11623 | 35092;35093;35094 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
Novex-2 | 11690 | 35293;35294;35295 | chr2:178590038;178590037;178590036 | chr2:179454765;179454764;179454763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.916 | N | 0.558 | 0.201 | 0.592827455569 | gnomAD-4.0.0 | 6.8451E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52755E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1278288633 | -0.836 | 0.002 | N | 0.128 | 0.095 | 0.461058313273 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1278288633 | -0.836 | 0.002 | N | 0.128 | 0.095 | 0.461058313273 | gnomAD-4.0.0 | 1.59279E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78195E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2897 | likely_benign | 0.2846 | benign | -1.596 | Destabilizing | 0.25 | N | 0.461 | neutral | None | None | None | None | I |
I/C | 0.7029 | likely_pathogenic | 0.7097 | pathogenic | -0.994 | Destabilizing | 0.977 | D | 0.57 | neutral | None | None | None | None | I |
I/D | 0.7132 | likely_pathogenic | 0.6664 | pathogenic | -0.757 | Destabilizing | 0.92 | D | 0.617 | neutral | None | None | None | None | I |
I/E | 0.6018 | likely_pathogenic | 0.5683 | pathogenic | -0.741 | Destabilizing | 0.92 | D | 0.62 | neutral | None | None | None | None | I |
I/F | 0.1773 | likely_benign | 0.1828 | benign | -1.065 | Destabilizing | 0.81 | D | 0.555 | neutral | N | 0.463986248 | None | None | I |
I/G | 0.6773 | likely_pathogenic | 0.6734 | pathogenic | -1.931 | Destabilizing | 0.766 | D | 0.616 | neutral | None | None | None | None | I |
I/H | 0.4892 | ambiguous | 0.4751 | ambiguous | -1.096 | Destabilizing | 0.992 | D | 0.594 | neutral | None | None | None | None | I |
I/K | 0.4311 | ambiguous | 0.4095 | ambiguous | -0.988 | Destabilizing | 0.85 | D | 0.626 | neutral | None | None | None | None | I |
I/L | 0.1104 | likely_benign | 0.1199 | benign | -0.749 | Destabilizing | 0.099 | N | 0.267 | neutral | N | 0.441186746 | None | None | I |
I/M | 0.1056 | likely_benign | 0.1067 | benign | -0.609 | Destabilizing | 0.916 | D | 0.558 | neutral | N | 0.479859777 | None | None | I |
I/N | 0.2822 | likely_benign | 0.2611 | benign | -0.824 | Destabilizing | 0.896 | D | 0.619 | neutral | N | 0.409882404 | None | None | I |
I/P | 0.8141 | likely_pathogenic | 0.8155 | pathogenic | -1.0 | Destabilizing | 0.972 | D | 0.621 | neutral | None | None | None | None | I |
I/Q | 0.4593 | ambiguous | 0.4298 | ambiguous | -0.973 | Destabilizing | 0.972 | D | 0.623 | neutral | None | None | None | None | I |
I/R | 0.3366 | likely_benign | 0.3323 | benign | -0.446 | Destabilizing | 0.92 | D | 0.625 | neutral | None | None | None | None | I |
I/S | 0.2823 | likely_benign | 0.2627 | benign | -1.508 | Destabilizing | 0.379 | N | 0.586 | neutral | N | 0.425830505 | None | None | I |
I/T | 0.1534 | likely_benign | 0.15 | benign | -1.371 | Destabilizing | 0.007 | N | 0.241 | neutral | N | 0.385042675 | None | None | I |
I/V | 0.0675 | likely_benign | 0.0711 | benign | -1.0 | Destabilizing | 0.002 | N | 0.128 | neutral | N | 0.455366765 | None | None | I |
I/W | 0.7538 | likely_pathogenic | 0.7685 | pathogenic | -1.121 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | I |
I/Y | 0.4916 | ambiguous | 0.4999 | ambiguous | -0.89 | Destabilizing | 0.92 | D | 0.611 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.