Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20594 | 62005;62006;62007 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
N2AB | 18953 | 57082;57083;57084 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
N2A | 18026 | 54301;54302;54303 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
N2B | 11529 | 34810;34811;34812 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
Novex-1 | 11654 | 35185;35186;35187 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
Novex-2 | 11721 | 35386;35387;35388 | chr2:178589945;178589944;178589943 | chr2:179454672;179454671;179454670 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.873 | N | 0.344 | 0.208 | 0.620567169836 | gnomAD-4.0.0 | 2.73781E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59859E-06 | 0 | 0 |
L/Q | None | None | 0.029 | N | 0.279 | 0.142 | 0.497806138765 | gnomAD-4.0.0 | 6.84452E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99646E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.104 | likely_benign | 0.1133 | benign | -0.377 | Destabilizing | 0.209 | N | 0.307 | neutral | None | None | None | None | N |
L/C | 0.4822 | ambiguous | 0.5264 | ambiguous | -0.644 | Destabilizing | 0.991 | D | 0.277 | neutral | None | None | None | None | N |
L/D | 0.404 | ambiguous | 0.4292 | ambiguous | -0.232 | Destabilizing | 0.39 | N | 0.336 | neutral | None | None | None | None | N |
L/E | 0.1732 | likely_benign | 0.1769 | benign | -0.336 | Destabilizing | 0.002 | N | 0.235 | neutral | None | None | None | None | N |
L/F | 0.1601 | likely_benign | 0.1709 | benign | -0.571 | Destabilizing | 0.818 | D | 0.287 | neutral | None | None | None | None | N |
L/G | 0.3612 | ambiguous | 0.3931 | ambiguous | -0.483 | Destabilizing | 0.561 | D | 0.367 | neutral | None | None | None | None | N |
L/H | 0.2147 | likely_benign | 0.2208 | benign | 0.116 | Stabilizing | 0.901 | D | 0.273 | neutral | None | None | None | None | N |
L/I | 0.0715 | likely_benign | 0.0691 | benign | -0.227 | Destabilizing | 0.003 | N | 0.187 | neutral | N | 0.44846693 | None | None | N |
L/K | 0.1599 | likely_benign | 0.1616 | benign | -0.25 | Destabilizing | 0.007 | N | 0.191 | neutral | None | None | None | None | N |
L/M | 0.0995 | likely_benign | 0.1035 | benign | -0.458 | Destabilizing | 0.818 | D | 0.311 | neutral | None | None | None | None | N |
L/N | 0.2169 | likely_benign | 0.2349 | benign | -0.057 | Destabilizing | 0.818 | D | 0.358 | neutral | None | None | None | None | N |
L/P | 0.182 | likely_benign | 0.2029 | benign | -0.248 | Destabilizing | 0.873 | D | 0.344 | neutral | N | 0.4483495 | None | None | N |
L/Q | 0.0995 | likely_benign | 0.0992 | benign | -0.27 | Destabilizing | 0.029 | N | 0.279 | neutral | N | 0.446253344 | None | None | N |
L/R | 0.1809 | likely_benign | 0.1837 | benign | 0.236 | Stabilizing | 0.326 | N | 0.373 | neutral | N | 0.4483495 | None | None | N |
L/S | 0.1318 | likely_benign | 0.1439 | benign | -0.428 | Destabilizing | 0.561 | D | 0.329 | neutral | None | None | None | None | N |
L/T | 0.1078 | likely_benign | 0.119 | benign | -0.431 | Destabilizing | 0.561 | D | 0.327 | neutral | None | None | None | None | N |
L/V | 0.0696 | likely_benign | 0.0718 | benign | -0.248 | Destabilizing | 0.003 | N | 0.173 | neutral | N | 0.439596731 | None | None | N |
L/W | 0.3328 | likely_benign | 0.3534 | ambiguous | -0.597 | Destabilizing | 0.991 | D | 0.32 | neutral | None | None | None | None | N |
L/Y | 0.3594 | ambiguous | 0.368 | ambiguous | -0.341 | Destabilizing | 0.901 | D | 0.284 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.