Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20611 | 62056;62057;62058 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
N2AB | 18970 | 57133;57134;57135 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
N2A | 18043 | 54352;54353;54354 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
N2B | 11546 | 34861;34862;34863 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
Novex-1 | 11671 | 35236;35237;35238 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
Novex-2 | 11738 | 35437;35438;35439 | chr2:178589894;178589893;178589892 | chr2:179454621;179454620;179454619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.765 | 0.348 | 0.318540980066 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1614 | likely_benign | 0.1793 | benign | -1.493 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.454928756 | None | None | N |
P/C | 0.8309 | likely_pathogenic | 0.8517 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/D | 0.9005 | likely_pathogenic | 0.9076 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/E | 0.7366 | likely_pathogenic | 0.7415 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/F | 0.9137 | likely_pathogenic | 0.9222 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
P/G | 0.632 | likely_pathogenic | 0.661 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/H | 0.6979 | likely_pathogenic | 0.7107 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
P/I | 0.5798 | likely_pathogenic | 0.6234 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/K | 0.7396 | likely_pathogenic | 0.7325 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
P/L | 0.3999 | ambiguous | 0.4283 | ambiguous | -0.702 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.490465481 | None | None | N |
P/M | 0.6579 | likely_pathogenic | 0.6959 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/N | 0.774 | likely_pathogenic | 0.8028 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/Q | 0.5399 | ambiguous | 0.5521 | ambiguous | -1.148 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.503029347 | None | None | N |
P/R | 0.6605 | likely_pathogenic | 0.6379 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.511360828 | None | None | N |
P/S | 0.4209 | ambiguous | 0.4273 | ambiguous | -1.46 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.455102114 | None | None | N |
P/T | 0.3026 | likely_benign | 0.3284 | benign | -1.347 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.423952488 | None | None | N |
P/V | 0.4107 | ambiguous | 0.4518 | ambiguous | -0.932 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
P/W | 0.9625 | likely_pathogenic | 0.9638 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/Y | 0.8769 | likely_pathogenic | 0.8934 | pathogenic | -1.069 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.