Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20628 | 62107;62108;62109 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
N2AB | 18987 | 57184;57185;57186 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
N2A | 18060 | 54403;54404;54405 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
N2B | 11563 | 34912;34913;34914 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
Novex-1 | 11688 | 35287;35288;35289 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
Novex-2 | 11755 | 35488;35489;35490 | chr2:178589843;178589842;178589841 | chr2:179454570;179454569;179454568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs778583635 | -0.711 | None | N | 0.195 | 0.078 | 0.316788114976 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs778583635 | -0.711 | None | N | 0.195 | 0.078 | 0.316788114976 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77855E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5906 | likely_pathogenic | 0.6513 | pathogenic | -1.896 | Destabilizing | 0.072 | N | 0.486 | neutral | None | None | None | None | N |
I/C | 0.7346 | likely_pathogenic | 0.7302 | pathogenic | -1.235 | Destabilizing | 0.909 | D | 0.65 | neutral | None | None | None | None | N |
I/D | 0.9384 | likely_pathogenic | 0.9471 | pathogenic | -1.44 | Destabilizing | 0.726 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/E | 0.8457 | likely_pathogenic | 0.8436 | pathogenic | -1.289 | Destabilizing | 0.726 | D | 0.688 | prob.neutral | None | None | None | None | N |
I/F | 0.2136 | likely_benign | 0.2241 | benign | -1.017 | Destabilizing | 0.497 | N | 0.556 | neutral | N | 0.475749532 | None | None | N |
I/G | 0.8424 | likely_pathogenic | 0.8783 | pathogenic | -2.358 | Highly Destabilizing | 0.726 | D | 0.667 | neutral | None | None | None | None | N |
I/H | 0.7608 | likely_pathogenic | 0.7516 | pathogenic | -1.505 | Destabilizing | 0.968 | D | 0.776 | deleterious | None | None | None | None | N |
I/K | 0.7526 | likely_pathogenic | 0.7366 | pathogenic | -1.42 | Destabilizing | 0.726 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/L | 0.14 | likely_benign | 0.1677 | benign | -0.623 | Destabilizing | 0.025 | N | 0.387 | neutral | N | 0.438980655 | None | None | N |
I/M | 0.1497 | likely_benign | 0.1632 | benign | -0.574 | Destabilizing | 0.497 | N | 0.601 | neutral | N | 0.497239525 | None | None | N |
I/N | 0.5967 | likely_pathogenic | 0.6432 | pathogenic | -1.579 | Destabilizing | 0.859 | D | 0.751 | deleterious | N | 0.484232942 | None | None | N |
I/P | 0.9277 | likely_pathogenic | 0.9419 | pathogenic | -1.021 | Destabilizing | 0.89 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Q | 0.6818 | likely_pathogenic | 0.6775 | pathogenic | -1.517 | Destabilizing | 0.89 | D | 0.767 | deleterious | None | None | None | None | N |
I/R | 0.6904 | likely_pathogenic | 0.6613 | pathogenic | -1.056 | Destabilizing | 0.726 | D | 0.758 | deleterious | None | None | None | None | N |
I/S | 0.5867 | likely_pathogenic | 0.6349 | pathogenic | -2.297 | Highly Destabilizing | 0.497 | N | 0.612 | neutral | N | 0.484059584 | None | None | N |
I/T | 0.4582 | ambiguous | 0.5064 | ambiguous | -2.0 | Highly Destabilizing | 0.124 | N | 0.513 | neutral | N | 0.398763255 | None | None | N |
I/V | 0.0826 | likely_benign | 0.1012 | benign | -1.021 | Destabilizing | None | N | 0.195 | neutral | N | 0.428224944 | None | None | N |
I/W | 0.8932 | likely_pathogenic | 0.8429 | pathogenic | -1.234 | Destabilizing | 0.968 | D | 0.785 | deleterious | None | None | None | None | N |
I/Y | 0.6304 | likely_pathogenic | 0.6186 | pathogenic | -0.95 | Destabilizing | 0.726 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.