Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20647 | 62164;62165;62166 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
N2AB | 19006 | 57241;57242;57243 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
N2A | 18079 | 54460;54461;54462 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
N2B | 11582 | 34969;34970;34971 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
Novex-1 | 11707 | 35344;35345;35346 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
Novex-2 | 11774 | 35545;35546;35547 | chr2:178589786;178589785;178589784 | chr2:179454513;179454512;179454511 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs751883286 | 0.303 | 1.0 | N | 0.665 | 0.399 | 0.402755899245 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs751883286 | 0.303 | 1.0 | N | 0.665 | 0.399 | 0.402755899245 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | I | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7307 | likely_pathogenic | 0.7476 | pathogenic | -0.052 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | I |
K/C | 0.9352 | likely_pathogenic | 0.9425 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
K/D | 0.8838 | likely_pathogenic | 0.8854 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
K/E | 0.5491 | ambiguous | 0.5955 | pathogenic | 0.102 | Stabilizing | 0.999 | D | 0.595 | neutral | N | 0.477325613 | None | None | I |
K/F | 0.9721 | likely_pathogenic | 0.9733 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
K/G | 0.8646 | likely_pathogenic | 0.8776 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.553 | neutral | None | None | None | None | I |
K/H | 0.668 | likely_pathogenic | 0.6953 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
K/I | 0.6873 | likely_pathogenic | 0.689 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.64 | neutral | N | 0.509862105 | None | None | I |
K/L | 0.7622 | likely_pathogenic | 0.7648 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.553 | neutral | None | None | None | None | I |
K/M | 0.6217 | likely_pathogenic | 0.6399 | pathogenic | 0.253 | Stabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
K/N | 0.8421 | likely_pathogenic | 0.8481 | pathogenic | 0.23 | Stabilizing | 1.0 | D | 0.67 | neutral | N | 0.474318072 | None | None | I |
K/P | 0.9073 | likely_pathogenic | 0.8826 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/Q | 0.3736 | ambiguous | 0.4127 | ambiguous | 0.014 | Stabilizing | 1.0 | D | 0.665 | neutral | N | 0.514035774 | None | None | I |
K/R | 0.1275 | likely_benign | 0.1414 | benign | -0.007 | Destabilizing | 0.999 | D | 0.516 | neutral | N | 0.509899391 | None | None | I |
K/S | 0.8128 | likely_pathogenic | 0.8286 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
K/T | 0.4992 | ambiguous | 0.5175 | ambiguous | -0.15 | Destabilizing | 1.0 | D | 0.612 | neutral | N | 0.468784664 | None | None | I |
K/V | 0.6448 | likely_pathogenic | 0.6457 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
K/W | 0.9657 | likely_pathogenic | 0.9709 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/Y | 0.9245 | likely_pathogenic | 0.9304 | pathogenic | 0.038 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.