Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20678 | 62257;62258;62259 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
N2AB | 19037 | 57334;57335;57336 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
N2A | 18110 | 54553;54554;54555 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
N2B | 11613 | 35062;35063;35064 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
Novex-1 | 11738 | 35437;35438;35439 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
Novex-2 | 11805 | 35638;35639;35640 | chr2:178589693;178589692;178589691 | chr2:179454420;179454419;179454418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.852 | N | 0.454 | 0.204 | 0.371344866733 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.626 | likely_pathogenic | 0.5969 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
A/D | 0.8007 | likely_pathogenic | 0.7128 | pathogenic | -1.117 | Destabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | N |
A/E | 0.6609 | likely_pathogenic | 0.5651 | pathogenic | -1.159 | Destabilizing | 0.988 | D | 0.451 | neutral | N | 0.422779052 | None | None | N |
A/F | 0.647 | likely_pathogenic | 0.5557 | ambiguous | -0.89 | Destabilizing | 0.982 | D | 0.555 | neutral | None | None | None | None | N |
A/G | 0.3261 | likely_benign | 0.307 | benign | -0.964 | Destabilizing | 0.035 | N | 0.141 | neutral | N | 0.440039448 | None | None | N |
A/H | 0.7631 | likely_pathogenic | 0.7284 | pathogenic | -1.146 | Destabilizing | 0.999 | D | 0.516 | neutral | None | None | None | None | N |
A/I | 0.5178 | ambiguous | 0.4225 | ambiguous | -0.282 | Destabilizing | 0.884 | D | 0.426 | neutral | None | None | None | None | N |
A/K | 0.8739 | likely_pathogenic | 0.8235 | pathogenic | -1.118 | Destabilizing | 0.969 | D | 0.449 | neutral | None | None | None | None | N |
A/L | 0.3911 | ambiguous | 0.3239 | benign | -0.282 | Destabilizing | 0.046 | N | 0.315 | neutral | None | None | None | None | N |
A/M | 0.4321 | ambiguous | 0.3834 | ambiguous | -0.185 | Destabilizing | 0.982 | D | 0.49 | neutral | None | None | None | None | N |
A/N | 0.6533 | likely_pathogenic | 0.5629 | ambiguous | -0.732 | Destabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | N |
A/P | 0.9289 | likely_pathogenic | 0.8952 | pathogenic | -0.395 | Destabilizing | 0.996 | D | 0.479 | neutral | N | 0.458798567 | None | None | N |
A/Q | 0.5962 | likely_pathogenic | 0.5545 | ambiguous | -0.905 | Destabilizing | 0.997 | D | 0.506 | neutral | None | None | None | None | N |
A/R | 0.7937 | likely_pathogenic | 0.7429 | pathogenic | -0.726 | Destabilizing | 0.991 | D | 0.484 | neutral | None | None | None | None | N |
A/S | 0.1438 | likely_benign | 0.1274 | benign | -0.987 | Destabilizing | 0.704 | D | 0.479 | neutral | N | 0.389991843 | None | None | N |
A/T | 0.1609 | likely_benign | 0.1351 | benign | -0.947 | Destabilizing | 0.061 | N | 0.11 | neutral | N | 0.347491859 | None | None | N |
A/V | 0.266 | likely_benign | 0.2271 | benign | -0.395 | Destabilizing | 0.852 | D | 0.454 | neutral | N | 0.380721785 | None | None | N |
A/W | 0.9163 | likely_pathogenic | 0.8801 | pathogenic | -1.249 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
A/Y | 0.7994 | likely_pathogenic | 0.7308 | pathogenic | -0.848 | Destabilizing | 0.997 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.