Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20694 | 62305;62306;62307 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
N2AB | 19053 | 57382;57383;57384 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
N2A | 18126 | 54601;54602;54603 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
N2B | 11629 | 35110;35111;35112 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
Novex-1 | 11754 | 35485;35486;35487 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
Novex-2 | 11821 | 35686;35687;35688 | chr2:178589645;178589644;178589643 | chr2:179454372;179454371;179454370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | None | None | 1.0 | N | 0.645 | 0.347 | 0.545346552841 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9045 | likely_pathogenic | 0.8069 | pathogenic | -0.737 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
Y/C | 0.6242 | likely_pathogenic | 0.3557 | ambiguous | 0.11 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.478580352 | None | None | N |
Y/D | 0.753 | likely_pathogenic | 0.5428 | ambiguous | 1.02 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.467873836 | None | None | N |
Y/E | 0.9473 | likely_pathogenic | 0.8785 | pathogenic | 0.999 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
Y/F | 0.1762 | likely_benign | 0.1338 | benign | -0.386 | Destabilizing | 0.434 | N | 0.283 | neutral | N | 0.482189928 | None | None | N |
Y/G | 0.8257 | likely_pathogenic | 0.7514 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
Y/H | 0.5572 | ambiguous | 0.3806 | ambiguous | 0.171 | Stabilizing | 1.0 | D | 0.653 | neutral | N | 0.508413737 | None | None | N |
Y/I | 0.9027 | likely_pathogenic | 0.7757 | pathogenic | -0.276 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
Y/K | 0.9301 | likely_pathogenic | 0.8604 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
Y/L | 0.8689 | likely_pathogenic | 0.7821 | pathogenic | -0.276 | Destabilizing | 0.994 | D | 0.556 | neutral | None | None | None | None | N |
Y/M | 0.9105 | likely_pathogenic | 0.8313 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
Y/N | 0.4039 | ambiguous | 0.2626 | benign | 0.073 | Stabilizing | 1.0 | D | 0.673 | neutral | N | 0.451963021 | None | None | N |
Y/P | 0.9947 | likely_pathogenic | 0.9895 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
Y/Q | 0.9203 | likely_pathogenic | 0.832 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
Y/R | 0.8228 | likely_pathogenic | 0.7253 | pathogenic | 0.507 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
Y/S | 0.5512 | ambiguous | 0.3899 | ambiguous | -0.406 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.468585912 | None | None | N |
Y/T | 0.8256 | likely_pathogenic | 0.6629 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
Y/V | 0.8278 | likely_pathogenic | 0.6699 | pathogenic | -0.41 | Destabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | N |
Y/W | 0.6519 | likely_pathogenic | 0.5856 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.