Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20705 | 62338;62339;62340 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
N2AB | 19064 | 57415;57416;57417 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
N2A | 18137 | 54634;54635;54636 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
N2B | 11640 | 35143;35144;35145 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
Novex-1 | 11765 | 35518;35519;35520 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
Novex-2 | 11832 | 35719;35720;35721 | chr2:178589612;178589611;178589610 | chr2:179454339;179454338;179454337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1318869377 | None | 0.134 | N | 0.226 | 0.162 | 0.452450644169 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1318869377 | None | 0.134 | N | 0.226 | 0.162 | 0.452450644169 | gnomAD-4.0.0 | 2.56411E-06 | None | None | None | None | N | None | 1.69233E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39499E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9209 | likely_pathogenic | 0.9255 | pathogenic | -2.587 | Highly Destabilizing | 0.906 | D | 0.576 | neutral | D | 0.528145945 | None | None | N |
V/C | 0.9788 | likely_pathogenic | 0.9777 | pathogenic | -1.999 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -3.02 | Highly Destabilizing | 0.996 | D | 0.863 | deleterious | D | 0.528906413 | None | None | N |
V/E | 0.9976 | likely_pathogenic | 0.9966 | pathogenic | -2.774 | Highly Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | N |
V/F | 0.9424 | likely_pathogenic | 0.9357 | pathogenic | -1.463 | Destabilizing | 0.976 | D | 0.711 | prob.delet. | D | 0.528652924 | None | None | N |
V/G | 0.9781 | likely_pathogenic | 0.9736 | pathogenic | -3.019 | Highly Destabilizing | 0.996 | D | 0.815 | deleterious | D | 0.528906413 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.568 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0988 | likely_benign | 0.1113 | benign | -1.289 | Destabilizing | 0.134 | N | 0.226 | neutral | N | 0.461535015 | None | None | N |
V/K | 0.9979 | likely_pathogenic | 0.9971 | pathogenic | -2.208 | Highly Destabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | N |
V/L | 0.5785 | likely_pathogenic | 0.5719 | pathogenic | -1.289 | Destabilizing | 0.005 | N | 0.299 | neutral | N | 0.472698945 | None | None | N |
V/M | 0.7927 | likely_pathogenic | 0.8142 | pathogenic | -1.668 | Destabilizing | 0.982 | D | 0.599 | neutral | None | None | None | None | N |
V/N | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -2.815 | Highly Destabilizing | 0.997 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.9981 | likely_pathogenic | 0.9968 | pathogenic | -1.716 | Destabilizing | 0.997 | D | 0.835 | deleterious | None | None | None | None | N |
V/Q | 0.9975 | likely_pathogenic | 0.9964 | pathogenic | -2.515 | Highly Destabilizing | 0.997 | D | 0.85 | deleterious | None | None | None | None | N |
V/R | 0.9958 | likely_pathogenic | 0.9934 | pathogenic | -2.224 | Highly Destabilizing | 0.997 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.9918 | likely_pathogenic | 0.9903 | pathogenic | -3.14 | Highly Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
V/T | 0.9346 | likely_pathogenic | 0.9375 | pathogenic | -2.781 | Highly Destabilizing | 0.969 | D | 0.567 | neutral | None | None | None | None | N |
V/W | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.64 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9971 | likely_pathogenic | 0.9966 | pathogenic | -1.661 | Destabilizing | 0.997 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.