Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20714 | 62365;62366;62367 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
N2AB | 19073 | 57442;57443;57444 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
N2A | 18146 | 54661;54662;54663 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
N2B | 11649 | 35170;35171;35172 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
Novex-1 | 11774 | 35545;35546;35547 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
Novex-2 | 11841 | 35746;35747;35748 | chr2:178589585;178589584;178589583 | chr2:179454312;179454311;179454310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | N | 0.117 | 0.07 | 0.166414681773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0855 | likely_benign | 0.1252 | benign | -0.153 | Destabilizing | 0.003 | N | 0.185 | neutral | N | 0.425475427 | None | None | N |
D/C | 0.357 | ambiguous | 0.5651 | pathogenic | -0.122 | Destabilizing | 0.983 | D | 0.351 | neutral | None | None | None | None | N |
D/E | 0.0707 | likely_benign | 0.102 | benign | -0.238 | Destabilizing | None | N | 0.117 | neutral | N | 0.377604122 | None | None | N |
D/F | 0.3256 | likely_benign | 0.5148 | ambiguous | -0.14 | Destabilizing | 0.94 | D | 0.353 | neutral | None | None | None | None | N |
D/G | 0.1099 | likely_benign | 0.1737 | benign | -0.297 | Destabilizing | 0.101 | N | 0.325 | neutral | N | 0.441135526 | None | None | N |
D/H | 0.1597 | likely_benign | 0.2551 | benign | 0.366 | Stabilizing | 0.794 | D | 0.276 | neutral | N | 0.448968362 | None | None | N |
D/I | 0.1302 | likely_benign | 0.1966 | benign | 0.169 | Stabilizing | 0.836 | D | 0.372 | neutral | None | None | None | None | N |
D/K | 0.1416 | likely_benign | 0.2238 | benign | 0.346 | Stabilizing | 0.129 | N | 0.327 | neutral | None | None | None | None | N |
D/L | 0.1707 | likely_benign | 0.2449 | benign | 0.169 | Stabilizing | 0.418 | N | 0.361 | neutral | None | None | None | None | N |
D/M | 0.2763 | likely_benign | 0.4393 | ambiguous | 0.078 | Stabilizing | 0.94 | D | 0.351 | neutral | None | None | None | None | N |
D/N | 0.0736 | likely_benign | 0.102 | benign | 0.105 | Stabilizing | 0.351 | N | 0.296 | neutral | N | 0.4505258 | None | None | N |
D/P | 0.6055 | likely_pathogenic | 0.7165 | pathogenic | 0.082 | Stabilizing | 0.593 | D | 0.313 | neutral | None | None | None | None | N |
D/Q | 0.1339 | likely_benign | 0.2151 | benign | 0.119 | Stabilizing | 0.027 | N | 0.163 | neutral | None | None | None | None | N |
D/R | 0.1999 | likely_benign | 0.3208 | benign | 0.609 | Stabilizing | 0.418 | N | 0.363 | neutral | None | None | None | None | N |
D/S | 0.0784 | likely_benign | 0.105 | benign | -0.019 | Destabilizing | 0.129 | N | 0.329 | neutral | None | None | None | None | N |
D/T | 0.093 | likely_benign | 0.1358 | benign | 0.1 | Stabilizing | 0.418 | N | 0.33 | neutral | None | None | None | None | N |
D/V | 0.0891 | likely_benign | 0.1198 | benign | 0.082 | Stabilizing | 0.351 | N | 0.361 | neutral | N | 0.451392592 | None | None | N |
D/W | 0.7383 | likely_pathogenic | 0.8643 | pathogenic | -0.041 | Destabilizing | 0.983 | D | 0.378 | neutral | None | None | None | None | N |
D/Y | 0.1594 | likely_benign | 0.251 | benign | 0.097 | Stabilizing | 0.921 | D | 0.356 | neutral | N | 0.497703672 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.