Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20731 | 62416;62417;62418 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
N2AB | 19090 | 57493;57494;57495 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
N2A | 18163 | 54712;54713;54714 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
N2B | 11666 | 35221;35222;35223 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
Novex-1 | 11791 | 35596;35597;35598 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
Novex-2 | 11858 | 35797;35798;35799 | chr2:178589534;178589533;178589532 | chr2:179454261;179454260;179454259 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.998 | N | 0.747 | 0.434 | 0.359963025489 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6308 | likely_pathogenic | 0.6722 | pathogenic | -0.468 | Destabilizing | 0.999 | D | 0.743 | deleterious | N | 0.474632024 | None | None | N |
D/C | 0.948 | likely_pathogenic | 0.9615 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
D/E | 0.2785 | likely_benign | 0.3791 | ambiguous | -0.603 | Destabilizing | 0.767 | D | 0.292 | neutral | N | 0.479267053 | None | None | N |
D/F | 0.9423 | likely_pathogenic | 0.9657 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/G | 0.5455 | ambiguous | 0.6191 | pathogenic | -0.787 | Destabilizing | 0.998 | D | 0.747 | deleterious | N | 0.508283238 | None | None | N |
D/H | 0.7599 | likely_pathogenic | 0.8114 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.508109879 | None | None | N |
D/I | 0.9117 | likely_pathogenic | 0.9395 | pathogenic | 0.36 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
D/K | 0.8396 | likely_pathogenic | 0.8761 | pathogenic | -0.361 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
D/L | 0.8613 | likely_pathogenic | 0.8829 | pathogenic | 0.36 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
D/M | 0.9435 | likely_pathogenic | 0.9652 | pathogenic | 0.667 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
D/N | 0.303 | likely_benign | 0.3682 | ambiguous | -0.728 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.49764217 | None | None | N |
D/P | 0.8715 | likely_pathogenic | 0.8958 | pathogenic | 0.109 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
D/Q | 0.7596 | likely_pathogenic | 0.8067 | pathogenic | -0.601 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
D/R | 0.8699 | likely_pathogenic | 0.8995 | pathogenic | -0.154 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
D/S | 0.3804 | ambiguous | 0.4226 | ambiguous | -0.924 | Destabilizing | 0.997 | D | 0.628 | neutral | None | None | None | None | N |
D/T | 0.6834 | likely_pathogenic | 0.7398 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
D/V | 0.805 | likely_pathogenic | 0.8479 | pathogenic | 0.109 | Stabilizing | 0.999 | D | 0.836 | deleterious | N | 0.507763163 | None | None | N |
D/W | 0.9831 | likely_pathogenic | 0.9873 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
D/Y | 0.7588 | likely_pathogenic | 0.8027 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.827 | deleterious | N | 0.469976433 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.