Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20740 | 62443;62444;62445 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
N2AB | 19099 | 57520;57521;57522 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
N2A | 18172 | 54739;54740;54741 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
N2B | 11675 | 35248;35249;35250 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
Novex-1 | 11800 | 35623;35624;35625 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
Novex-2 | 11867 | 35824;35825;35826 | chr2:178589507;178589506;178589505 | chr2:179454234;179454233;179454232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs766362512 | -1.568 | 0.183 | N | 0.501 | 0.093 | 0.290222751274 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs766362512 | -1.568 | 0.183 | N | 0.501 | 0.093 | 0.290222751274 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | N | None | 0 | 2.28812E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1451572769 | -0.358 | 0.101 | N | 0.525 | 0.183 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/K | rs1451572769 | -0.358 | 0.101 | N | 0.525 | 0.183 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1451572769 | -0.358 | 0.101 | N | 0.525 | 0.183 | None | gnomAD-4.0.0 | 1.36367E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69542E-05 | 0 | 3.20318E-05 |
E/V | rs559490402 | 0.916 | 0.351 | N | 0.617 | 0.222 | 0.312001716656 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/V | rs559490402 | 0.916 | 0.351 | N | 0.617 | 0.222 | 0.312001716656 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/V | rs559490402 | 0.916 | 0.351 | N | 0.617 | 0.222 | 0.312001716656 | gnomAD-4.0.0 | 4.33895E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93408E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.266 | likely_benign | 0.3898 | ambiguous | -1.035 | Destabilizing | 0.047 | N | 0.482 | neutral | N | 0.497530313 | None | None | N |
E/C | 0.8056 | likely_pathogenic | 0.8792 | pathogenic | -0.387 | Destabilizing | 0.983 | D | 0.617 | neutral | None | None | None | None | N |
E/D | 0.4701 | ambiguous | 0.5729 | pathogenic | -1.457 | Destabilizing | 0.183 | N | 0.501 | neutral | N | 0.474170396 | None | None | N |
E/F | 0.7534 | likely_pathogenic | 0.8681 | pathogenic | -0.574 | Destabilizing | 0.94 | D | 0.581 | neutral | None | None | None | None | N |
E/G | 0.5323 | ambiguous | 0.6244 | pathogenic | -1.48 | Destabilizing | 0.001 | N | 0.486 | neutral | N | 0.492363556 | None | None | N |
E/H | 0.5794 | likely_pathogenic | 0.7088 | pathogenic | -0.632 | Destabilizing | 0.716 | D | 0.575 | neutral | None | None | None | None | N |
E/I | 0.3629 | ambiguous | 0.5433 | ambiguous | 0.238 | Stabilizing | 0.716 | D | 0.616 | neutral | None | None | None | None | N |
E/K | 0.4032 | ambiguous | 0.56 | ambiguous | -1.027 | Destabilizing | 0.101 | N | 0.525 | neutral | N | 0.478077761 | None | None | N |
E/L | 0.4371 | ambiguous | 0.6225 | pathogenic | 0.238 | Stabilizing | 0.418 | N | 0.613 | neutral | None | None | None | None | N |
E/M | 0.461 | ambiguous | 0.6325 | pathogenic | 0.927 | Stabilizing | 0.836 | D | 0.56 | neutral | None | None | None | None | N |
E/N | 0.5516 | ambiguous | 0.6984 | pathogenic | -1.385 | Destabilizing | 0.418 | N | 0.567 | neutral | None | None | None | None | N |
E/P | 0.9943 | likely_pathogenic | 0.9965 | pathogenic | -0.17 | Destabilizing | 0.593 | D | 0.602 | neutral | None | None | None | None | N |
E/Q | 0.1456 | likely_benign | 0.1939 | benign | -1.037 | Destabilizing | 0.001 | N | 0.21 | neutral | N | 0.419800249 | None | None | N |
E/R | 0.4994 | ambiguous | 0.6314 | pathogenic | -0.963 | Destabilizing | 0.264 | N | 0.569 | neutral | None | None | None | None | N |
E/S | 0.3194 | likely_benign | 0.4338 | ambiguous | -2.035 | Highly Destabilizing | 0.129 | N | 0.491 | neutral | None | None | None | None | N |
E/T | 0.2995 | likely_benign | 0.4227 | ambiguous | -1.612 | Destabilizing | 0.004 | N | 0.351 | neutral | None | None | None | None | N |
E/V | 0.2497 | likely_benign | 0.3968 | ambiguous | -0.17 | Destabilizing | 0.351 | N | 0.617 | neutral | N | 0.49683688 | None | None | N |
E/W | 0.9265 | likely_pathogenic | 0.9606 | pathogenic | -0.648 | Destabilizing | 0.983 | D | 0.629 | neutral | None | None | None | None | N |
E/Y | 0.7004 | likely_pathogenic | 0.8213 | pathogenic | -0.361 | Destabilizing | 0.836 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.