Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20781 | 62566;62567;62568 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
N2AB | 19140 | 57643;57644;57645 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
N2A | 18213 | 54862;54863;54864 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
N2B | 11716 | 35371;35372;35373 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
Novex-1 | 11841 | 35746;35747;35748 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
Novex-2 | 11908 | 35947;35948;35949 | chr2:178589384;178589383;178589382 | chr2:179454111;179454110;179454109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 1.0 | D | 0.568 | 0.748 | 0.895171775139 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5418 | ambiguous | 0.5856 | pathogenic | -1.865 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.496352169 | None | None | I |
V/C | 0.8577 | likely_pathogenic | 0.8834 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
V/D | 0.988 | likely_pathogenic | 0.9899 | pathogenic | -1.893 | Destabilizing | 1.0 | D | 0.629 | neutral | D | 0.547284747 | None | None | I |
V/E | 0.9423 | likely_pathogenic | 0.9503 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | I |
V/F | 0.5991 | likely_pathogenic | 0.6607 | pathogenic | -1.305 | Destabilizing | 1.0 | D | 0.568 | neutral | D | 0.523647083 | None | None | I |
V/G | 0.7915 | likely_pathogenic | 0.8127 | pathogenic | -2.27 | Highly Destabilizing | 1.0 | D | 0.599 | neutral | D | 0.540029818 | None | None | I |
V/H | 0.9776 | likely_pathogenic | 0.9832 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
V/I | 0.1018 | likely_benign | 0.1141 | benign | -0.811 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.517612876 | None | None | I |
V/K | 0.9395 | likely_pathogenic | 0.9453 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | I |
V/L | 0.4733 | ambiguous | 0.5296 | ambiguous | -0.811 | Destabilizing | 0.997 | D | 0.575 | neutral | N | 0.496424567 | None | None | I |
V/M | 0.441 | ambiguous | 0.5085 | ambiguous | -0.678 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
V/N | 0.9573 | likely_pathogenic | 0.9648 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
V/P | 0.989 | likely_pathogenic | 0.9906 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.584 | neutral | None | None | None | None | I |
V/Q | 0.9076 | likely_pathogenic | 0.9224 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
V/R | 0.9134 | likely_pathogenic | 0.9214 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
V/S | 0.8328 | likely_pathogenic | 0.8604 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | I |
V/T | 0.6571 | likely_pathogenic | 0.685 | pathogenic | -1.883 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | I |
V/W | 0.9889 | likely_pathogenic | 0.9924 | pathogenic | -1.594 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
V/Y | 0.9427 | likely_pathogenic | 0.9604 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.