Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20782 | 62569;62570;62571 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
N2AB | 19141 | 57646;57647;57648 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
N2A | 18214 | 54865;54866;54867 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
N2B | 11717 | 35374;35375;35376 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
Novex-1 | 11842 | 35749;35750;35751 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
Novex-2 | 11909 | 35950;35951;35952 | chr2:178589381;178589380;178589379 | chr2:179454108;179454107;179454106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.477 | N | 0.583 | 0.302 | 0.340032825777 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/T | rs750969532 | 0.003 | 0.864 | N | 0.558 | 0.426 | 0.391000631824 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/T | rs750969532 | 0.003 | 0.864 | N | 0.558 | 0.426 | 0.391000631824 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7265 | likely_pathogenic | 0.7321 | pathogenic | -0.051 | Destabilizing | 0.707 | D | 0.591 | neutral | None | None | None | None | I |
K/C | 0.8697 | likely_pathogenic | 0.8703 | pathogenic | -0.356 | Destabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/D | 0.9245 | likely_pathogenic | 0.9341 | pathogenic | 0.071 | Stabilizing | 0.894 | D | 0.579 | neutral | None | None | None | None | I |
K/E | 0.6167 | likely_pathogenic | 0.6467 | pathogenic | 0.102 | Stabilizing | 0.477 | N | 0.583 | neutral | N | 0.51181748 | None | None | I |
K/F | 0.9119 | likely_pathogenic | 0.9178 | pathogenic | -0.146 | Destabilizing | 0.985 | D | 0.666 | neutral | None | None | None | None | I |
K/G | 0.8479 | likely_pathogenic | 0.8437 | pathogenic | -0.281 | Destabilizing | 0.894 | D | 0.565 | neutral | None | None | None | None | I |
K/H | 0.4818 | ambiguous | 0.486 | ambiguous | -0.471 | Destabilizing | 0.985 | D | 0.574 | neutral | None | None | None | None | I |
K/I | 0.72 | likely_pathogenic | 0.7557 | pathogenic | 0.485 | Stabilizing | 0.928 | D | 0.677 | prob.neutral | N | 0.51734073 | None | None | I |
K/L | 0.6077 | likely_pathogenic | 0.6338 | pathogenic | 0.485 | Stabilizing | 0.894 | D | 0.565 | neutral | None | None | None | None | I |
K/M | 0.511 | ambiguous | 0.5646 | pathogenic | 0.159 | Stabilizing | 0.995 | D | 0.579 | neutral | None | None | None | None | I |
K/N | 0.8192 | likely_pathogenic | 0.8435 | pathogenic | 0.014 | Stabilizing | 0.864 | D | 0.578 | neutral | N | 0.513145632 | None | None | I |
K/P | 0.8281 | likely_pathogenic | 0.8024 | pathogenic | 0.335 | Stabilizing | 0.945 | D | 0.562 | neutral | None | None | None | None | I |
K/Q | 0.291 | likely_benign | 0.2991 | benign | -0.106 | Destabilizing | 0.864 | D | 0.578 | neutral | N | 0.503659357 | None | None | I |
K/R | 0.0866 | likely_benign | 0.081 | benign | -0.128 | Destabilizing | 0.006 | N | 0.333 | neutral | N | 0.428046877 | None | None | I |
K/S | 0.821 | likely_pathogenic | 0.8383 | pathogenic | -0.488 | Destabilizing | 0.707 | D | 0.59 | neutral | None | None | None | None | I |
K/T | 0.5213 | ambiguous | 0.5565 | ambiguous | -0.296 | Destabilizing | 0.864 | D | 0.558 | neutral | N | 0.497618819 | None | None | I |
K/V | 0.6383 | likely_pathogenic | 0.675 | pathogenic | 0.335 | Stabilizing | 0.894 | D | 0.626 | neutral | None | None | None | None | I |
K/W | 0.8966 | likely_pathogenic | 0.8849 | pathogenic | -0.154 | Destabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | I |
K/Y | 0.8359 | likely_pathogenic | 0.8451 | pathogenic | 0.187 | Stabilizing | 0.945 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.