Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20797 | 62614;62615;62616 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
N2AB | 19156 | 57691;57692;57693 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
N2A | 18229 | 54910;54911;54912 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
N2B | 11732 | 35419;35420;35421 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
Novex-1 | 11857 | 35794;35795;35796 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
Novex-2 | 11924 | 35995;35996;35997 | chr2:178589336;178589335;178589334 | chr2:179454063;179454062;179454061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.755 | 0.604 | 0.828969124369 | gnomAD-4.0.0 | 6.84547E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99818E-07 | 0 | 0 |
P/Q | None | None | 1.0 | D | 0.775 | 0.707 | 0.682284130214 | gnomAD-4.0.0 | 1.36909E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9737 | likely_pathogenic | 0.9739 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | D | 0.552403763 | None | None | I |
P/C | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -0.53 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/D | 0.9903 | likely_pathogenic | 0.991 | pathogenic | -0.74 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/E | 0.9941 | likely_pathogenic | 0.9943 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
P/F | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
P/G | 0.9848 | likely_pathogenic | 0.9819 | pathogenic | -1.04 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
P/H | 0.9919 | likely_pathogenic | 0.9905 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/I | 0.9871 | likely_pathogenic | 0.9896 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
P/K | 0.9951 | likely_pathogenic | 0.9944 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
P/L | 0.976 | likely_pathogenic | 0.9804 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.645442306 | None | None | I |
P/M | 0.9945 | likely_pathogenic | 0.9956 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
P/N | 0.9892 | likely_pathogenic | 0.9891 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
P/Q | 0.9931 | likely_pathogenic | 0.9922 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.578901808 | None | None | I |
P/R | 0.9884 | likely_pathogenic | 0.9857 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.628787172 | None | None | I |
P/S | 0.9919 | likely_pathogenic | 0.9912 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.56687394 | None | None | I |
P/T | 0.9796 | likely_pathogenic | 0.9801 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.619500586 | None | None | I |
P/V | 0.9746 | likely_pathogenic | 0.9784 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
P/W | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
P/Y | 0.9966 | likely_pathogenic | 0.9964 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.