Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20800 | 62623;62624;62625 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
N2AB | 19159 | 57700;57701;57702 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
N2A | 18232 | 54919;54920;54921 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
N2B | 11735 | 35428;35429;35430 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
Novex-1 | 11860 | 35803;35804;35805 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
Novex-2 | 11927 | 36004;36005;36006 | chr2:178589327;178589326;178589325 | chr2:179454054;179454053;179454052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1404277332 | -0.449 | 0.822 | N | 0.608 | 0.337 | 0.465294738428 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1404277332 | -0.449 | 0.822 | N | 0.608 | 0.337 | 0.465294738428 | gnomAD-4.0.0 | 1.59335E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.7767E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.144 | likely_benign | 0.1303 | benign | -0.134 | Destabilizing | 0.822 | D | 0.595 | neutral | N | 0.508625246 | None | None | I |
E/C | 0.8324 | likely_pathogenic | 0.8465 | pathogenic | -0.093 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
E/D | 0.115 | likely_benign | 0.1236 | benign | -0.323 | Destabilizing | 0.014 | N | 0.311 | neutral | N | 0.488441975 | None | None | I |
E/F | 0.7625 | likely_pathogenic | 0.7425 | pathogenic | -0.063 | Destabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/G | 0.2712 | likely_benign | 0.2416 | benign | -0.307 | Destabilizing | 0.822 | D | 0.608 | neutral | N | 0.499623664 | None | None | I |
E/H | 0.4534 | ambiguous | 0.4286 | ambiguous | 0.345 | Stabilizing | 0.998 | D | 0.61 | neutral | None | None | None | None | I |
E/I | 0.2786 | likely_benign | 0.2663 | benign | 0.276 | Stabilizing | 0.956 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/K | 0.1859 | likely_benign | 0.158 | benign | 0.418 | Stabilizing | 0.822 | D | 0.571 | neutral | N | 0.475800752 | None | None | I |
E/L | 0.3419 | ambiguous | 0.3242 | benign | 0.276 | Stabilizing | 0.956 | D | 0.659 | neutral | None | None | None | None | I |
E/M | 0.4271 | ambiguous | 0.4052 | ambiguous | 0.15 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/N | 0.2119 | likely_benign | 0.2093 | benign | 0.107 | Stabilizing | 0.915 | D | 0.6 | neutral | None | None | None | None | I |
E/P | 0.9087 | likely_pathogenic | 0.9022 | pathogenic | 0.159 | Stabilizing | 0.978 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/Q | 0.1414 | likely_benign | 0.1286 | benign | 0.139 | Stabilizing | 0.942 | D | 0.604 | neutral | N | 0.472741804 | None | None | I |
E/R | 0.3394 | likely_benign | 0.2877 | benign | 0.66 | Stabilizing | 0.978 | D | 0.616 | neutral | None | None | None | None | I |
E/S | 0.1773 | likely_benign | 0.1675 | benign | -0.034 | Destabilizing | 0.754 | D | 0.553 | neutral | None | None | None | None | I |
E/T | 0.1547 | likely_benign | 0.1417 | benign | 0.109 | Stabilizing | 0.16 | N | 0.383 | neutral | None | None | None | None | I |
E/V | 0.1563 | likely_benign | 0.1472 | benign | 0.159 | Stabilizing | 0.942 | D | 0.605 | neutral | N | 0.50978004 | None | None | I |
E/W | 0.9338 | likely_pathogenic | 0.9272 | pathogenic | 0.036 | Stabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | I |
E/Y | 0.6644 | likely_pathogenic | 0.6526 | pathogenic | 0.175 | Stabilizing | 0.993 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.