Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20814 | 62665;62666;62667 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
N2AB | 19173 | 57742;57743;57744 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
N2A | 18246 | 54961;54962;54963 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
N2B | 11749 | 35470;35471;35472 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
Novex-1 | 11874 | 35845;35846;35847 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
Novex-2 | 11941 | 36046;36047;36048 | chr2:178589285;178589284;178589283 | chr2:179454012;179454011;179454010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.896 | N | 0.491 | 0.241 | 0.465464902746 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2668 | likely_benign | 0.2917 | benign | -0.059 | Destabilizing | 0.919 | D | 0.539 | neutral | None | None | None | None | N |
R/C | 0.1778 | likely_benign | 0.2258 | benign | -0.113 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
R/D | 0.4836 | ambiguous | 0.5649 | pathogenic | -0.132 | Destabilizing | 0.976 | D | 0.451 | neutral | None | None | None | None | N |
R/E | 0.3191 | likely_benign | 0.3614 | ambiguous | -0.097 | Destabilizing | 0.851 | D | 0.507 | neutral | None | None | None | None | N |
R/F | 0.5022 | ambiguous | 0.559 | ambiguous | -0.384 | Destabilizing | 0.996 | D | 0.582 | neutral | None | None | None | None | N |
R/G | 0.164 | likely_benign | 0.188 | benign | -0.207 | Destabilizing | 0.896 | D | 0.491 | neutral | N | 0.460735299 | None | None | N |
R/H | 0.1086 | likely_benign | 0.1235 | benign | -0.666 | Destabilizing | 0.996 | D | 0.477 | neutral | None | None | None | None | N |
R/I | 0.262 | likely_benign | 0.2878 | benign | 0.288 | Stabilizing | 0.984 | D | 0.581 | neutral | N | 0.466026476 | None | None | N |
R/K | 0.0876 | likely_benign | 0.093 | benign | -0.059 | Destabilizing | 0.011 | N | 0.179 | neutral | N | 0.449555513 | None | None | N |
R/L | 0.2035 | likely_benign | 0.2235 | benign | 0.288 | Stabilizing | 0.919 | D | 0.491 | neutral | None | None | None | None | N |
R/M | 0.2623 | likely_benign | 0.2961 | benign | 0.032 | Stabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
R/N | 0.4137 | ambiguous | 0.471 | ambiguous | 0.21 | Stabilizing | 0.919 | D | 0.45 | neutral | None | None | None | None | N |
R/P | 0.4079 | ambiguous | 0.4868 | ambiguous | 0.191 | Stabilizing | 0.988 | D | 0.539 | neutral | None | None | None | None | N |
R/Q | 0.1031 | likely_benign | 0.11 | benign | 0.061 | Stabilizing | 0.919 | D | 0.477 | neutral | None | None | None | None | N |
R/S | 0.345 | ambiguous | 0.3838 | ambiguous | -0.123 | Destabilizing | 0.896 | D | 0.496 | neutral | N | 0.436084784 | None | None | N |
R/T | 0.205 | likely_benign | 0.2264 | benign | 0.022 | Stabilizing | 0.896 | D | 0.499 | neutral | N | 0.453769254 | None | None | N |
R/V | 0.2891 | likely_benign | 0.3068 | benign | 0.191 | Stabilizing | 0.988 | D | 0.521 | neutral | None | None | None | None | N |
R/W | 0.2163 | likely_benign | 0.2581 | benign | -0.479 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
R/Y | 0.3656 | ambiguous | 0.4317 | ambiguous | -0.071 | Destabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.