Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20819 | 62680;62681;62682 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
N2AB | 19178 | 57757;57758;57759 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
N2A | 18251 | 54976;54977;54978 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
N2B | 11754 | 35485;35486;35487 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
Novex-1 | 11879 | 35860;35861;35862 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
Novex-2 | 11946 | 36061;36062;36063 | chr2:178589270;178589269;178589268 | chr2:179453997;179453996;179453995 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs561142365 | 0.684 | 0.334 | N | 0.431 | 0.251 | 0.247872288689 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23514E-04 | None | 0 | None | 0 | 0 | 0 |
K/E | rs561142365 | 0.684 | 0.334 | N | 0.431 | 0.251 | 0.247872288689 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.88199E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs561142365 | 0.684 | 0.334 | N | 0.431 | 0.251 | 0.247872288689 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
K/E | rs561142365 | 0.684 | 0.334 | N | 0.431 | 0.251 | 0.247872288689 | gnomAD-4.0.0 | 4.95825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.78707E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs2049719955 | None | 0.004 | N | 0.173 | 0.076 | 0.141422826196 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs2049719955 | None | 0.004 | N | 0.173 | 0.076 | 0.141422826196 | gnomAD-4.0.0 | 1.85953E-06 | None | None | None | None | N | None | 4.00545E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs780962150 | None | 0.549 | N | 0.421 | 0.107 | 0.299770980665 | gnomAD-4.0.0 | 1.71084E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24893E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2361 | likely_benign | 0.2088 | benign | -0.009 | Destabilizing | 0.25 | N | 0.402 | neutral | None | None | None | None | N |
K/C | 0.5195 | ambiguous | 0.508 | ambiguous | -0.389 | Destabilizing | 0.992 | D | 0.509 | neutral | None | None | None | None | N |
K/D | 0.4865 | ambiguous | 0.4464 | ambiguous | 0.094 | Stabilizing | 0.447 | N | 0.464 | neutral | None | None | None | None | N |
K/E | 0.182 | likely_benign | 0.1685 | benign | 0.118 | Stabilizing | 0.334 | N | 0.431 | neutral | N | 0.454425402 | None | None | N |
K/F | 0.6196 | likely_pathogenic | 0.5655 | pathogenic | -0.166 | Destabilizing | 0.92 | D | 0.524 | neutral | None | None | None | None | N |
K/G | 0.4194 | ambiguous | 0.3706 | ambiguous | -0.22 | Destabilizing | 0.25 | N | 0.447 | neutral | None | None | None | None | N |
K/H | 0.1871 | likely_benign | 0.1725 | benign | -0.409 | Destabilizing | 0.85 | D | 0.511 | neutral | None | None | None | None | N |
K/I | 0.2336 | likely_benign | 0.2147 | benign | 0.469 | Stabilizing | 0.85 | D | 0.511 | neutral | None | None | None | None | N |
K/L | 0.2783 | likely_benign | 0.2561 | benign | 0.469 | Stabilizing | 0.447 | N | 0.489 | neutral | None | None | None | None | N |
K/M | 0.1694 | likely_benign | 0.1534 | benign | 0.112 | Stabilizing | 0.963 | D | 0.51 | neutral | D | 0.522959981 | None | None | N |
K/N | 0.2983 | likely_benign | 0.2594 | benign | 0.023 | Stabilizing | 0.004 | N | 0.173 | neutral | N | 0.46439168 | None | None | N |
K/P | 0.9238 | likely_pathogenic | 0.9194 | pathogenic | 0.338 | Stabilizing | 0.92 | D | 0.526 | neutral | None | None | None | None | N |
K/Q | 0.0992 | likely_benign | 0.0911 | benign | -0.089 | Destabilizing | 0.549 | D | 0.457 | neutral | N | 0.46402632 | None | None | N |
K/R | 0.0828 | likely_benign | 0.082 | benign | -0.107 | Destabilizing | 0.549 | D | 0.421 | neutral | N | 0.434858207 | None | None | N |
K/S | 0.2558 | likely_benign | 0.231 | benign | -0.458 | Destabilizing | 0.003 | N | 0.137 | neutral | None | None | None | None | N |
K/T | 0.0981 | likely_benign | 0.0913 | benign | -0.277 | Destabilizing | 0.016 | N | 0.246 | neutral | N | 0.422334413 | None | None | N |
K/V | 0.2029 | likely_benign | 0.1918 | benign | 0.338 | Stabilizing | 0.447 | N | 0.482 | neutral | None | None | None | None | N |
K/W | 0.692 | likely_pathogenic | 0.6316 | pathogenic | -0.198 | Destabilizing | 0.992 | D | 0.565 | neutral | None | None | None | None | N |
K/Y | 0.5185 | ambiguous | 0.4775 | ambiguous | 0.156 | Stabilizing | 0.972 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.