Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20828 | 62707;62708;62709 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
N2AB | 19187 | 57784;57785;57786 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
N2A | 18260 | 55003;55004;55005 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
N2B | 11763 | 35512;35513;35514 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
Novex-1 | 11888 | 35887;35888;35889 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
Novex-2 | 11955 | 36088;36089;36090 | chr2:178589243;178589242;178589241 | chr2:179453970;179453969;179453968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2154183659 | None | 0.716 | N | 0.495 | 0.308 | 0.330331372229 | gnomAD-4.0.0 | 3.18368E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 3.02499E-05 |
K/T | None | None | 0.946 | N | 0.681 | 0.328 | 0.306695030598 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | N | None | 5.65803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2067 | likely_benign | 0.217 | benign | -0.591 | Destabilizing | 0.87 | D | 0.547 | neutral | None | None | None | None | N |
K/C | 0.3775 | ambiguous | 0.3973 | ambiguous | -0.923 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
K/D | 0.6509 | likely_pathogenic | 0.6325 | pathogenic | -0.842 | Destabilizing | 0.959 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/E | 0.2316 | likely_benign | 0.2126 | benign | -0.753 | Destabilizing | 0.716 | D | 0.495 | neutral | N | 0.441802822 | None | None | N |
K/F | 0.5411 | ambiguous | 0.5503 | ambiguous | -0.603 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
K/G | 0.4321 | ambiguous | 0.4259 | ambiguous | -0.921 | Destabilizing | 0.959 | D | 0.671 | neutral | None | None | None | None | N |
K/H | 0.1794 | likely_benign | 0.1897 | benign | -1.352 | Destabilizing | 0.994 | D | 0.762 | deleterious | None | None | None | None | N |
K/I | 0.155 | likely_benign | 0.1634 | benign | 0.251 | Stabilizing | 0.973 | D | 0.79 | deleterious | N | 0.442381612 | None | None | N |
K/L | 0.2321 | likely_benign | 0.2422 | benign | 0.251 | Stabilizing | 0.959 | D | 0.671 | neutral | None | None | None | None | N |
K/M | 0.1601 | likely_benign | 0.1626 | benign | 0.285 | Stabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
K/N | 0.3921 | ambiguous | 0.3998 | ambiguous | -0.713 | Destabilizing | 0.946 | D | 0.635 | neutral | N | 0.467085268 | None | None | N |
K/P | 0.9599 | likely_pathogenic | 0.9523 | pathogenic | -0.001 | Destabilizing | 0.979 | D | 0.751 | deleterious | None | None | None | None | N |
K/Q | 0.1026 | likely_benign | 0.1046 | benign | -0.931 | Destabilizing | 0.946 | D | 0.619 | neutral | N | 0.472125729 | None | None | N |
K/R | 0.074 | likely_benign | 0.0725 | benign | -0.583 | Destabilizing | 0.035 | N | 0.38 | neutral | N | 0.461639376 | None | None | N |
K/S | 0.2523 | likely_benign | 0.2618 | benign | -1.298 | Destabilizing | 0.87 | D | 0.571 | neutral | None | None | None | None | N |
K/T | 0.0858 | likely_benign | 0.0908 | benign | -1.017 | Destabilizing | 0.946 | D | 0.681 | prob.neutral | N | 0.381596938 | None | None | N |
K/V | 0.138 | likely_benign | 0.1428 | benign | -0.001 | Destabilizing | 0.959 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/W | 0.6322 | likely_pathogenic | 0.6022 | pathogenic | -0.514 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
K/Y | 0.4449 | ambiguous | 0.4487 | ambiguous | -0.114 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.