Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20830 | 62713;62714;62715 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
N2AB | 19189 | 57790;57791;57792 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
N2A | 18262 | 55009;55010;55011 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
N2B | 11765 | 35518;35519;35520 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
Novex-1 | 11890 | 35893;35894;35895 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
Novex-2 | 11957 | 36094;36095;36096 | chr2:178589237;178589236;178589235 | chr2:179453964;179453963;179453962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.602 | N | 0.643 | 0.226 | 0.361758802978 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0851 | likely_benign | 0.0892 | benign | -0.683 | Destabilizing | 0.001 | N | 0.279 | neutral | N | 0.49173021 | None | None | N |
S/C | 0.0752 | likely_benign | 0.0772 | benign | -0.412 | Destabilizing | 0.602 | D | 0.591 | neutral | D | 0.530115239 | None | None | N |
S/D | 0.4768 | ambiguous | 0.5674 | pathogenic | -0.627 | Destabilizing | 0.22 | N | 0.575 | neutral | None | None | None | None | N |
S/E | 0.4581 | ambiguous | 0.515 | ambiguous | -0.479 | Destabilizing | 0.22 | N | 0.543 | neutral | None | None | None | None | N |
S/F | 0.0913 | likely_benign | 0.0938 | benign | -0.543 | Destabilizing | 0.175 | N | 0.614 | neutral | N | 0.468469348 | None | None | N |
S/G | 0.1527 | likely_benign | 0.1695 | benign | -1.06 | Destabilizing | 0.104 | N | 0.515 | neutral | None | None | None | None | N |
S/H | 0.2397 | likely_benign | 0.2628 | benign | -1.435 | Destabilizing | 0.859 | D | 0.597 | neutral | None | None | None | None | N |
S/I | 0.0692 | likely_benign | 0.0651 | benign | 0.255 | Stabilizing | None | N | 0.423 | neutral | None | None | None | None | N |
S/K | 0.7217 | likely_pathogenic | 0.7724 | pathogenic | -0.203 | Destabilizing | 0.104 | N | 0.542 | neutral | None | None | None | None | N |
S/L | 0.0603 | likely_benign | 0.0586 | benign | 0.255 | Stabilizing | None | N | 0.364 | neutral | None | None | None | None | N |
S/M | 0.1044 | likely_benign | 0.1052 | benign | 0.153 | Stabilizing | 0.497 | N | 0.633 | neutral | None | None | None | None | N |
S/N | 0.1451 | likely_benign | 0.1624 | benign | -0.652 | Destabilizing | 0.22 | N | 0.579 | neutral | None | None | None | None | N |
S/P | 0.9046 | likely_pathogenic | 0.9334 | pathogenic | -0.021 | Destabilizing | 0.301 | N | 0.629 | neutral | N | 0.501772803 | None | None | N |
S/Q | 0.3994 | ambiguous | 0.4399 | ambiguous | -0.481 | Destabilizing | 0.364 | N | 0.605 | neutral | None | None | None | None | N |
S/R | 0.6124 | likely_pathogenic | 0.6538 | pathogenic | -0.53 | Destabilizing | 0.22 | N | 0.621 | neutral | None | None | None | None | N |
S/T | 0.0596 | likely_benign | 0.0627 | benign | -0.446 | Destabilizing | None | N | 0.321 | neutral | N | 0.397835827 | None | None | N |
S/V | 0.0857 | likely_benign | 0.0841 | benign | -0.021 | Destabilizing | None | N | 0.424 | neutral | None | None | None | None | N |
S/W | 0.2137 | likely_benign | 0.2153 | benign | -0.711 | Destabilizing | 0.958 | D | 0.633 | neutral | None | None | None | None | N |
S/Y | 0.1221 | likely_benign | 0.1292 | benign | -0.293 | Destabilizing | 0.602 | D | 0.643 | neutral | N | 0.483977518 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.