Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20831 | 62716;62717;62718 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
N2AB | 19190 | 57793;57794;57795 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
N2A | 18263 | 55012;55013;55014 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
N2B | 11766 | 35521;35522;35523 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
Novex-1 | 11891 | 35896;35897;35898 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
Novex-2 | 11958 | 36097;36098;36099 | chr2:178589234;178589233;178589232 | chr2:179453961;179453960;179453959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | N | 0.893 | 0.622 | 0.71338130811 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6631 | likely_pathogenic | 0.7412 | pathogenic | -2.548 | Highly Destabilizing | 0.997 | D | 0.749 | deleterious | None | None | None | None | N |
L/C | 0.5922 | likely_pathogenic | 0.7111 | pathogenic | -2.134 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/D | 0.9914 | likely_pathogenic | 0.9944 | pathogenic | -2.372 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/E | 0.9476 | likely_pathogenic | 0.9604 | pathogenic | -2.228 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/F | 0.3082 | likely_benign | 0.365 | ambiguous | -1.71 | Destabilizing | 0.999 | D | 0.807 | deleterious | N | 0.487327254 | None | None | N |
L/G | 0.9385 | likely_pathogenic | 0.9632 | pathogenic | -3.02 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/H | 0.7886 | likely_pathogenic | 0.8497 | pathogenic | -2.224 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.501460542 | None | None | N |
L/I | 0.1078 | likely_benign | 0.1078 | benign | -1.225 | Destabilizing | 0.992 | D | 0.639 | neutral | N | 0.315032724 | None | None | N |
L/K | 0.8759 | likely_pathogenic | 0.8974 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.1294 | likely_benign | 0.1432 | benign | -1.234 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/N | 0.9277 | likely_pathogenic | 0.957 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/P | 0.9886 | likely_pathogenic | 0.9923 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.501460542 | None | None | N |
L/Q | 0.688 | likely_pathogenic | 0.746 | pathogenic | -2.052 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/R | 0.8256 | likely_pathogenic | 0.862 | pathogenic | -1.409 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.501460542 | None | None | N |
L/S | 0.8559 | likely_pathogenic | 0.9069 | pathogenic | -2.813 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/T | 0.7508 | likely_pathogenic | 0.8171 | pathogenic | -2.528 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/V | 0.1114 | likely_benign | 0.1137 | benign | -1.643 | Destabilizing | 0.767 | D | 0.391 | neutral | N | 0.442418897 | None | None | N |
L/W | 0.7194 | likely_pathogenic | 0.7942 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/Y | 0.7092 | likely_pathogenic | 0.7925 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.