Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20901 | 62926;62927;62928 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
N2AB | 19260 | 58003;58004;58005 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
N2A | 18333 | 55222;55223;55224 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
N2B | 11836 | 35731;35732;35733 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
Novex-1 | 11961 | 36106;36107;36108 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
Novex-2 | 12028 | 36307;36308;36309 | chr2:178589024;178589023;178589022 | chr2:179453751;179453750;179453749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.058 | N | 0.364 | 0.08 | 0.187945064343 | gnomAD-4.0.0 | 1.37149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79947E-06 | 0 | 0 |
L/P | None | None | 0.99 | N | 0.855 | 0.575 | 0.854063423762 | gnomAD-4.0.0 | 1.59902E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79298E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8726 | likely_pathogenic | 0.8764 | pathogenic | -2.694 | Highly Destabilizing | 0.754 | D | 0.605 | neutral | None | None | None | None | N |
L/C | 0.8676 | likely_pathogenic | 0.8784 | pathogenic | -2.013 | Highly Destabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -3.277 | Highly Destabilizing | 0.993 | D | 0.854 | deleterious | None | None | None | None | N |
L/E | 0.9956 | likely_pathogenic | 0.9953 | pathogenic | -2.944 | Highly Destabilizing | 0.978 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.6445 | likely_pathogenic | 0.6554 | pathogenic | -1.596 | Destabilizing | 0.956 | D | 0.656 | neutral | None | None | None | None | N |
L/G | 0.9914 | likely_pathogenic | 0.9923 | pathogenic | -3.336 | Highly Destabilizing | 0.978 | D | 0.847 | deleterious | None | None | None | None | N |
L/H | 0.9906 | likely_pathogenic | 0.9905 | pathogenic | -3.027 | Highly Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
L/I | 0.0919 | likely_benign | 0.0838 | benign | -0.772 | Destabilizing | 0.058 | N | 0.364 | neutral | N | 0.384276592 | None | None | N |
L/K | 0.9942 | likely_pathogenic | 0.9937 | pathogenic | -2.08 | Highly Destabilizing | 0.978 | D | 0.83 | deleterious | None | None | None | None | N |
L/M | 0.2799 | likely_benign | 0.2922 | benign | -0.957 | Destabilizing | 0.956 | D | 0.621 | neutral | None | None | None | None | N |
L/N | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -2.78 | Highly Destabilizing | 0.993 | D | 0.849 | deleterious | None | None | None | None | N |
L/P | 0.9945 | likely_pathogenic | 0.9947 | pathogenic | -1.402 | Destabilizing | 0.99 | D | 0.855 | deleterious | N | 0.488986649 | None | None | N |
L/Q | 0.9847 | likely_pathogenic | 0.9843 | pathogenic | -2.412 | Highly Destabilizing | 0.99 | D | 0.838 | deleterious | N | 0.500342955 | None | None | N |
L/R | 0.9881 | likely_pathogenic | 0.9877 | pathogenic | -2.153 | Highly Destabilizing | 0.971 | D | 0.841 | deleterious | N | 0.500342955 | None | None | N |
L/S | 0.9871 | likely_pathogenic | 0.9881 | pathogenic | -3.414 | Highly Destabilizing | 0.956 | D | 0.825 | deleterious | None | None | None | None | N |
L/T | 0.8872 | likely_pathogenic | 0.8853 | pathogenic | -2.902 | Highly Destabilizing | 0.956 | D | 0.68 | prob.neutral | None | None | None | None | N |
L/V | 0.0896 | likely_benign | 0.0825 | benign | -1.402 | Destabilizing | 0.014 | N | 0.325 | neutral | N | 0.377710405 | None | None | N |
L/W | 0.9656 | likely_pathogenic | 0.964 | pathogenic | -2.003 | Highly Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
L/Y | 0.9751 | likely_pathogenic | 0.9761 | pathogenic | -1.748 | Destabilizing | 0.978 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.