Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20943 | 63052;63053;63054 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
N2AB | 19302 | 58129;58130;58131 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
N2A | 18375 | 55348;55349;55350 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
N2B | 11878 | 35857;35858;35859 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
Novex-1 | 12003 | 36232;36233;36234 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
Novex-2 | 12070 | 36433;36434;36435 | chr2:178588898;178588897;178588896 | chr2:179453625;179453624;179453623 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.619 | 0.508 | 0.39798585902 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7081 | likely_pathogenic | 0.7778 | pathogenic | 0.048 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
K/C | 0.9008 | likely_pathogenic | 0.9181 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/D | 0.8981 | likely_pathogenic | 0.9227 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
K/E | 0.6196 | likely_pathogenic | 0.6992 | pathogenic | -0.172 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.476786895 | None | None | I |
K/F | 0.9554 | likely_pathogenic | 0.967 | pathogenic | -0.231 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
K/G | 0.807 | likely_pathogenic | 0.8713 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | I |
K/H | 0.5778 | likely_pathogenic | 0.6064 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | I |
K/I | 0.7337 | likely_pathogenic | 0.771 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.645 | neutral | N | 0.520367101 | None | None | I |
K/L | 0.7114 | likely_pathogenic | 0.7503 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | I |
K/M | 0.6123 | likely_pathogenic | 0.669 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | I |
K/N | 0.8327 | likely_pathogenic | 0.8684 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.657 | neutral | N | 0.4833702 | None | None | I |
K/P | 0.8493 | likely_pathogenic | 0.8928 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | I |
K/Q | 0.3259 | likely_benign | 0.3834 | ambiguous | -0.008 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.514843851 | None | None | I |
K/R | 0.0962 | likely_benign | 0.1017 | benign | -0.009 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.499125037 | None | None | I |
K/S | 0.8005 | likely_pathogenic | 0.8521 | pathogenic | -0.258 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
K/T | 0.55 | ambiguous | 0.6207 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.469936753 | None | None | I |
K/V | 0.6666 | likely_pathogenic | 0.7193 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
K/W | 0.9261 | likely_pathogenic | 0.9474 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
K/Y | 0.8813 | likely_pathogenic | 0.9043 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.