Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20988 | 63187;63188;63189 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
N2AB | 19347 | 58264;58265;58266 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
N2A | 18420 | 55483;55484;55485 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
N2B | 11923 | 35992;35993;35994 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
Novex-1 | 12048 | 36367;36368;36369 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
Novex-2 | 12115 | 36568;36569;36570 | chr2:178588763;178588762;178588761 | chr2:179453490;179453489;179453488 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs2049605788 | None | 0.989 | N | 0.575 | 0.338 | 0.380730819819 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93949E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs2049605788 | None | 0.989 | N | 0.575 | 0.338 | 0.380730819819 | gnomAD-4.0.0 | 1.41002E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.67575E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.125 | likely_benign | 0.1282 | benign | -0.031 | Destabilizing | 0.989 | D | 0.575 | neutral | N | 0.472458511 | None | None | I |
E/C | 0.7487 | likely_pathogenic | 0.7584 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/D | 0.1352 | likely_benign | 0.1469 | benign | -0.457 | Destabilizing | 0.994 | D | 0.514 | neutral | N | 0.47638425 | None | None | I |
E/F | 0.7138 | likely_pathogenic | 0.7301 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/G | 0.1899 | likely_benign | 0.2007 | benign | -0.131 | Destabilizing | 0.217 | N | 0.393 | neutral | N | 0.464764534 | None | None | I |
E/H | 0.4578 | ambiguous | 0.4761 | ambiguous | 0.613 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
E/I | 0.2597 | likely_benign | 0.2592 | benign | 0.174 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/K | 0.1604 | likely_benign | 0.1693 | benign | 0.326 | Stabilizing | 0.994 | D | 0.603 | neutral | N | 0.474997383 | None | None | I |
E/L | 0.3208 | likely_benign | 0.3261 | benign | 0.174 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/M | 0.3872 | ambiguous | 0.4063 | ambiguous | -0.121 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
E/N | 0.267 | likely_benign | 0.2835 | benign | 0.033 | Stabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | I |
E/P | 0.4451 | ambiguous | 0.429 | ambiguous | 0.123 | Stabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
E/Q | 0.1338 | likely_benign | 0.137 | benign | 0.038 | Stabilizing | 0.999 | D | 0.614 | neutral | N | 0.512459693 | None | None | I |
E/R | 0.2436 | likely_benign | 0.2536 | benign | 0.588 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
E/S | 0.1877 | likely_benign | 0.1933 | benign | -0.08 | Destabilizing | 0.992 | D | 0.607 | neutral | None | None | None | None | I |
E/T | 0.1961 | likely_benign | 0.1971 | benign | 0.014 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
E/V | 0.1628 | likely_benign | 0.1656 | benign | 0.123 | Stabilizing | 0.999 | D | 0.647 | neutral | N | 0.487217319 | None | None | I |
E/W | 0.8624 | likely_pathogenic | 0.8744 | pathogenic | -0.022 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/Y | 0.58 | likely_pathogenic | 0.5934 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.