Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20989 | 63190;63191;63192 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
N2AB | 19348 | 58267;58268;58269 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
N2A | 18421 | 55486;55487;55488 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
N2B | 11924 | 35995;35996;35997 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
Novex-1 | 12049 | 36370;36371;36372 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
Novex-2 | 12116 | 36571;36572;36573 | chr2:178588760;178588759;178588758 | chr2:179453487;179453486;179453485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1338725751 | 0.295 | 0.994 | N | 0.461 | 0.19 | 0.269111216191 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs1338725751 | 0.295 | 0.994 | N | 0.461 | 0.19 | 0.269111216191 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78149E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4118 | ambiguous | 0.3515 | ambiguous | -0.701 | Destabilizing | 0.985 | D | 0.545 | neutral | None | None | None | None | N |
Y/C | 0.1726 | likely_benign | 0.1688 | benign | 0.034 | Stabilizing | 1.0 | D | 0.597 | neutral | N | 0.503893351 | None | None | N |
Y/D | 0.1371 | likely_benign | 0.1228 | benign | 1.046 | Stabilizing | 0.925 | D | 0.562 | neutral | N | 0.370365932 | None | None | N |
Y/E | 0.43 | ambiguous | 0.3762 | ambiguous | 1.027 | Stabilizing | 0.97 | D | 0.561 | neutral | None | None | None | None | N |
Y/F | 0.1096 | likely_benign | 0.095 | benign | -0.341 | Destabilizing | 0.993 | D | 0.447 | neutral | N | 0.417543803 | None | None | N |
Y/G | 0.3748 | ambiguous | 0.3196 | benign | -0.882 | Destabilizing | 0.97 | D | 0.544 | neutral | None | None | None | None | N |
Y/H | 0.1648 | likely_benign | 0.1426 | benign | 0.21 | Stabilizing | 0.994 | D | 0.461 | neutral | N | 0.456966196 | None | None | N |
Y/I | 0.4594 | ambiguous | 0.408 | ambiguous | -0.255 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
Y/K | 0.3875 | ambiguous | 0.3372 | benign | 0.191 | Stabilizing | 0.97 | D | 0.549 | neutral | None | None | None | None | N |
Y/L | 0.4838 | ambiguous | 0.4274 | ambiguous | -0.255 | Destabilizing | 0.985 | D | 0.51 | neutral | None | None | None | None | N |
Y/M | 0.5071 | ambiguous | 0.4496 | ambiguous | -0.085 | Destabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | N |
Y/N | 0.0851 | likely_benign | 0.0807 | benign | 0.003 | Stabilizing | 0.122 | N | 0.241 | neutral | N | 0.401054198 | None | None | N |
Y/P | 0.931 | likely_pathogenic | 0.9192 | pathogenic | -0.384 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
Y/Q | 0.3914 | ambiguous | 0.3352 | benign | 0.043 | Stabilizing | 0.996 | D | 0.499 | neutral | None | None | None | None | N |
Y/R | 0.3485 | ambiguous | 0.2978 | benign | 0.459 | Stabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
Y/S | 0.1603 | likely_benign | 0.1395 | benign | -0.475 | Destabilizing | 0.961 | D | 0.543 | neutral | N | 0.425219137 | None | None | N |
Y/T | 0.284 | likely_benign | 0.233 | benign | -0.405 | Destabilizing | 0.97 | D | 0.563 | neutral | None | None | None | None | N |
Y/V | 0.3556 | ambiguous | 0.3082 | benign | -0.384 | Destabilizing | 0.995 | D | 0.517 | neutral | None | None | None | None | N |
Y/W | 0.4497 | ambiguous | 0.412 | ambiguous | -0.444 | Destabilizing | 1.0 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.