Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21033 | 63322;63323;63324 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
N2AB | 19392 | 58399;58400;58401 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
N2A | 18465 | 55618;55619;55620 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
N2B | 11968 | 36127;36128;36129 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
Novex-1 | 12093 | 36502;36503;36504 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
Novex-2 | 12160 | 36703;36704;36705 | chr2:178588628;178588627;178588626 | chr2:179453355;179453354;179453353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.992 | N | 0.523 | 0.372 | 0.366466682447 | gnomAD-4.0.0 | 6.9166E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04753E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.198 | likely_benign | 0.1898 | benign | -0.908 | Destabilizing | 0.996 | D | 0.583 | neutral | N | 0.473232117 | None | None | N |
E/C | 0.8319 | likely_pathogenic | 0.8117 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/D | 0.2292 | likely_benign | 0.2199 | benign | -1.555 | Destabilizing | 0.275 | N | 0.203 | neutral | N | 0.477712402 | None | None | N |
E/F | 0.7954 | likely_pathogenic | 0.7778 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.356 | ambiguous | 0.37 | ambiguous | -1.341 | Destabilizing | 0.998 | D | 0.668 | neutral | N | 0.478436357 | None | None | N |
E/H | 0.5989 | likely_pathogenic | 0.5598 | ambiguous | -0.795 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/I | 0.3619 | ambiguous | 0.3106 | benign | 0.305 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/K | 0.3093 | likely_benign | 0.2962 | benign | -1.594 | Destabilizing | 0.992 | D | 0.523 | neutral | N | 0.512766338 | None | None | N |
E/L | 0.4619 | ambiguous | 0.4253 | ambiguous | 0.305 | Stabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
E/M | 0.4843 | ambiguous | 0.4483 | ambiguous | 0.915 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/N | 0.4077 | ambiguous | 0.3963 | ambiguous | -1.919 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/P | 0.6202 | likely_pathogenic | 0.598 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/Q | 0.1786 | likely_benign | 0.1677 | benign | -1.632 | Destabilizing | 0.999 | D | 0.644 | neutral | N | 0.521540537 | None | None | N |
E/R | 0.4529 | ambiguous | 0.4238 | ambiguous | -1.364 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
E/S | 0.2638 | likely_benign | 0.2439 | benign | -2.386 | Highly Destabilizing | 0.994 | D | 0.564 | neutral | None | None | None | None | N |
E/T | 0.2581 | likely_benign | 0.2193 | benign | -2.026 | Highly Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/V | 0.2289 | likely_benign | 0.2045 | benign | -0.08 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.470131471 | None | None | N |
E/W | 0.9254 | likely_pathogenic | 0.9174 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/Y | 0.6982 | likely_pathogenic | 0.6814 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.