Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21052 | 63379;63380;63381 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
N2AB | 19411 | 58456;58457;58458 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
N2A | 18484 | 55675;55676;55677 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
N2B | 11987 | 36184;36185;36186 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
Novex-1 | 12112 | 36559;36560;36561 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
Novex-2 | 12179 | 36760;36761;36762 | chr2:178588571;178588570;178588569 | chr2:179453298;179453297;179453296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.995 | N | 0.724 | 0.372 | 0.541692676538 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0985 | likely_benign | 0.0852 | benign | -1.692 | Destabilizing | 0.429 | N | 0.408 | neutral | N | 0.494620507 | None | None | I |
P/C | 0.6022 | likely_pathogenic | 0.5605 | ambiguous | -1.029 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
P/D | 0.8926 | likely_pathogenic | 0.8675 | pathogenic | -1.478 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
P/E | 0.6551 | likely_pathogenic | 0.593 | pathogenic | -1.436 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
P/F | 0.764 | likely_pathogenic | 0.7248 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
P/G | 0.6658 | likely_pathogenic | 0.577 | pathogenic | -2.059 | Highly Destabilizing | 0.974 | D | 0.757 | deleterious | None | None | None | None | I |
P/H | 0.635 | likely_pathogenic | 0.5816 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.504752911 | None | None | I |
P/I | 0.386 | ambiguous | 0.3738 | ambiguous | -0.757 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | I |
P/K | 0.8374 | likely_pathogenic | 0.8038 | pathogenic | -1.238 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | I |
P/L | 0.2443 | likely_benign | 0.2399 | benign | -0.757 | Destabilizing | 0.995 | D | 0.724 | deleterious | N | 0.464110175 | None | None | I |
P/M | 0.5113 | ambiguous | 0.475 | ambiguous | -0.562 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
P/N | 0.7917 | likely_pathogenic | 0.7291 | pathogenic | -1.067 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | I |
P/Q | 0.5047 | ambiguous | 0.4511 | ambiguous | -1.193 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | I |
P/R | 0.6982 | likely_pathogenic | 0.6678 | pathogenic | -0.788 | Destabilizing | 0.998 | D | 0.849 | deleterious | N | 0.499219502 | None | None | I |
P/S | 0.2849 | likely_benign | 0.2351 | benign | -1.656 | Destabilizing | 0.99 | D | 0.744 | deleterious | N | 0.502778631 | None | None | I |
P/T | 0.2473 | likely_benign | 0.2191 | benign | -1.499 | Destabilizing | 0.995 | D | 0.716 | prob.delet. | N | 0.519132163 | None | None | I |
P/V | 0.2547 | likely_benign | 0.2446 | benign | -1.035 | Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/W | 0.9057 | likely_pathogenic | 0.8907 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
P/Y | 0.8044 | likely_pathogenic | 0.762 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.