Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2107 | 6544;6545;6546 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
N2AB | 2107 | 6544;6545;6546 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
N2A | 2107 | 6544;6545;6546 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
N2B | 2061 | 6406;6407;6408 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
Novex-1 | 2061 | 6406;6407;6408 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
Novex-2 | 2061 | 6406;6407;6408 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
Novex-3 | 2107 | 6544;6545;6546 | chr2:178775545;178775544;178775543 | chr2:179640272;179640271;179640270 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | D | 0.843 | 0.828 | 0.692713709614 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7242 | likely_pathogenic | 0.7099 | pathogenic | -1.814 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.670822469 | None | None | N |
P/C | 0.9839 | likely_pathogenic | 0.9801 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
P/D | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -2.487 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/E | 0.9978 | likely_pathogenic | 0.9977 | pathogenic | -2.436 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/F | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
P/G | 0.9848 | likely_pathogenic | 0.9856 | pathogenic | -2.187 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/H | 0.9972 | likely_pathogenic | 0.9968 | pathogenic | -1.867 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.76952242 | None | None | N |
P/I | 0.9447 | likely_pathogenic | 0.9304 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/K | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/L | 0.9329 | likely_pathogenic | 0.9288 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.659909943 | None | None | N |
P/M | 0.9813 | likely_pathogenic | 0.9791 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
P/N | 0.998 | likely_pathogenic | 0.998 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/Q | 0.9958 | likely_pathogenic | 0.9955 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
P/R | 0.9959 | likely_pathogenic | 0.9957 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.747149246 | None | None | N |
P/S | 0.9721 | likely_pathogenic | 0.97 | pathogenic | -1.938 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.802234167 | None | None | N |
P/T | 0.9257 | likely_pathogenic | 0.9211 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.746157966 | None | None | N |
P/V | 0.8827 | likely_pathogenic | 0.8618 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.689 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
P/Y | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -1.385 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.