Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21097 | 63514;63515;63516 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
N2AB | 19456 | 58591;58592;58593 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
N2A | 18529 | 55810;55811;55812 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
N2B | 12032 | 36319;36320;36321 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
Novex-1 | 12157 | 36694;36695;36696 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
Novex-2 | 12224 | 36895;36896;36897 | chr2:178588118;178588117;178588116 | chr2:179452845;179452844;179452843 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs759579228 | -0.684 | 0.942 | N | 0.635 | 0.306 | 0.635244795662 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/T | rs759579228 | -0.684 | 0.942 | N | 0.635 | 0.306 | 0.635244795662 | gnomAD-4.0.0 | 1.27456E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78443E-05 | None | 0 | 0 | 2.00317E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4255 | ambiguous | 0.3146 | benign | -1.283 | Destabilizing | 0.86 | D | 0.524 | neutral | None | None | None | None | I |
I/C | 0.8827 | likely_pathogenic | 0.812 | pathogenic | -0.723 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
I/D | 0.9303 | likely_pathogenic | 0.8789 | pathogenic | -0.729 | Destabilizing | 0.993 | D | 0.815 | deleterious | None | None | None | None | I |
I/E | 0.8168 | likely_pathogenic | 0.7292 | pathogenic | -0.782 | Destabilizing | 0.978 | D | 0.817 | deleterious | None | None | None | None | I |
I/F | 0.3268 | likely_benign | 0.2648 | benign | -0.988 | Destabilizing | 0.89 | D | 0.658 | neutral | N | 0.488396629 | None | None | I |
I/G | 0.8682 | likely_pathogenic | 0.7656 | pathogenic | -1.535 | Destabilizing | 0.978 | D | 0.815 | deleterious | None | None | None | None | I |
I/H | 0.8052 | likely_pathogenic | 0.7046 | pathogenic | -0.709 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | I |
I/K | 0.6561 | likely_pathogenic | 0.5503 | ambiguous | -0.827 | Destabilizing | 0.978 | D | 0.816 | deleterious | None | None | None | None | I |
I/L | 0.1634 | likely_benign | 0.1306 | benign | -0.7 | Destabilizing | 0.006 | N | 0.143 | neutral | N | 0.453312602 | None | None | I |
I/M | 0.1629 | likely_benign | 0.13 | benign | -0.504 | Destabilizing | 0.942 | D | 0.645 | neutral | N | 0.472520874 | None | None | I |
I/N | 0.6735 | likely_pathogenic | 0.5505 | ambiguous | -0.567 | Destabilizing | 0.99 | D | 0.819 | deleterious | N | 0.469531906 | None | None | I |
I/P | 0.9519 | likely_pathogenic | 0.912 | pathogenic | -0.861 | Destabilizing | 0.993 | D | 0.82 | deleterious | None | None | None | None | I |
I/Q | 0.723 | likely_pathogenic | 0.5941 | pathogenic | -0.813 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | I |
I/R | 0.5418 | ambiguous | 0.4398 | ambiguous | -0.163 | Destabilizing | 0.978 | D | 0.82 | deleterious | None | None | None | None | I |
I/S | 0.5184 | ambiguous | 0.3812 | ambiguous | -1.104 | Destabilizing | 0.971 | D | 0.711 | prob.delet. | N | 0.484731588 | None | None | I |
I/T | 0.1517 | likely_benign | 0.1252 | benign | -1.05 | Destabilizing | 0.942 | D | 0.635 | neutral | N | 0.408577603 | None | None | I |
I/V | 0.137 | likely_benign | 0.1184 | benign | -0.861 | Destabilizing | 0.294 | N | 0.325 | neutral | N | 0.493793788 | None | None | I |
I/W | 0.8727 | likely_pathogenic | 0.821 | pathogenic | -0.996 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | I |
I/Y | 0.7957 | likely_pathogenic | 0.695 | pathogenic | -0.793 | Destabilizing | 0.978 | D | 0.721 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.