Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21101 | 63526;63527;63528 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
N2AB | 19460 | 58603;58604;58605 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
N2A | 18533 | 55822;55823;55824 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
N2B | 12036 | 36331;36332;36333 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
Novex-1 | 12161 | 36706;36707;36708 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
Novex-2 | 12228 | 36907;36908;36909 | chr2:178588106;178588105;178588104 | chr2:179452833;179452832;179452831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.97 | D | 0.85 | 0.719 | 0.882891302514 | gnomAD-4.0.0 | 1.20039E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31257E-06 | 0 | 0 |
V/M | None | None | 0.489 | N | 0.383 | 0.356 | 0.557637382247 | gnomAD-4.0.0 | 1.59315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86157E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7547 | likely_pathogenic | 0.7675 | pathogenic | -2.282 | Highly Destabilizing | 0.822 | D | 0.541 | neutral | D | 0.535058478 | None | None | N |
V/C | 0.9552 | likely_pathogenic | 0.9611 | pathogenic | -1.555 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -3.257 | Highly Destabilizing | 0.993 | D | 0.885 | deleterious | None | None | None | None | N |
V/E | 0.9864 | likely_pathogenic | 0.9874 | pathogenic | -2.92 | Highly Destabilizing | 0.97 | D | 0.85 | deleterious | D | 0.553758618 | None | None | N |
V/F | 0.83 | likely_pathogenic | 0.8441 | pathogenic | -1.281 | Destabilizing | 0.956 | D | 0.762 | deleterious | None | None | None | None | N |
V/G | 0.919 | likely_pathogenic | 0.9277 | pathogenic | -2.897 | Highly Destabilizing | 0.97 | D | 0.858 | deleterious | D | 0.553758618 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9973 | pathogenic | -2.876 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.1027 | likely_benign | 0.0904 | benign | -0.471 | Destabilizing | 0.559 | D | 0.471 | neutral | None | None | None | None | N |
V/K | 0.9915 | likely_pathogenic | 0.9912 | pathogenic | -1.755 | Destabilizing | 0.956 | D | 0.829 | deleterious | None | None | None | None | N |
V/L | 0.3899 | ambiguous | 0.3679 | ambiguous | -0.471 | Destabilizing | 0.006 | N | 0.311 | neutral | N | 0.509870466 | None | None | N |
V/M | 0.5986 | likely_pathogenic | 0.5889 | pathogenic | -0.762 | Destabilizing | 0.489 | N | 0.383 | neutral | N | 0.519182723 | None | None | N |
V/N | 0.9913 | likely_pathogenic | 0.991 | pathogenic | -2.534 | Highly Destabilizing | 0.978 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.983 | likely_pathogenic | 0.9809 | pathogenic | -1.059 | Destabilizing | 0.993 | D | 0.862 | deleterious | None | None | None | None | N |
V/Q | 0.9877 | likely_pathogenic | 0.9877 | pathogenic | -2.11 | Highly Destabilizing | 0.978 | D | 0.872 | deleterious | None | None | None | None | N |
V/R | 0.9824 | likely_pathogenic | 0.9824 | pathogenic | -2.013 | Highly Destabilizing | 0.978 | D | 0.887 | deleterious | None | None | None | None | N |
V/S | 0.9592 | likely_pathogenic | 0.9602 | pathogenic | -2.973 | Highly Destabilizing | 0.956 | D | 0.812 | deleterious | None | None | None | None | N |
V/T | 0.8314 | likely_pathogenic | 0.827 | pathogenic | -2.471 | Highly Destabilizing | 0.86 | D | 0.564 | neutral | None | None | None | None | N |
V/W | 0.9962 | likely_pathogenic | 0.9963 | pathogenic | -1.817 | Destabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
V/Y | 0.9892 | likely_pathogenic | 0.9895 | pathogenic | -1.532 | Destabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.