Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21129 | 63610;63611;63612 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
N2AB | 19488 | 58687;58688;58689 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
N2A | 18561 | 55906;55907;55908 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
N2B | 12064 | 36415;36416;36417 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
Novex-1 | 12189 | 36790;36791;36792 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
Novex-2 | 12256 | 36991;36992;36993 | chr2:178588022;178588021;178588020 | chr2:179452749;179452748;179452747 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2049409124 | None | 0.885 | N | 0.449 | 0.242 | 0.273938319068 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86118E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2567 | likely_benign | 0.3257 | benign | -0.45 | Destabilizing | 0.939 | D | 0.505 | neutral | N | 0.491044271 | None | None | I |
E/C | 0.8776 | likely_pathogenic | 0.9049 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/D | 0.2388 | likely_benign | 0.2508 | benign | -0.943 | Destabilizing | 0.939 | D | 0.435 | neutral | N | 0.468027876 | None | None | I |
E/F | 0.8504 | likely_pathogenic | 0.8726 | pathogenic | 0.436 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/G | 0.3542 | ambiguous | 0.4227 | ambiguous | -0.862 | Destabilizing | 0.982 | D | 0.655 | neutral | N | 0.474927183 | None | None | I |
E/H | 0.6152 | likely_pathogenic | 0.6543 | pathogenic | 0.319 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
E/I | 0.4525 | ambiguous | 0.5216 | ambiguous | 0.685 | Stabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/K | 0.3861 | ambiguous | 0.4444 | ambiguous | -0.325 | Destabilizing | 0.885 | D | 0.449 | neutral | N | 0.4978556 | None | None | I |
E/L | 0.6216 | likely_pathogenic | 0.6791 | pathogenic | 0.685 | Stabilizing | 0.986 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/M | 0.5838 | likely_pathogenic | 0.6392 | pathogenic | 0.958 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/N | 0.4056 | ambiguous | 0.4512 | ambiguous | -1.026 | Destabilizing | 0.986 | D | 0.617 | neutral | None | None | None | None | I |
E/P | 0.9411 | likely_pathogenic | 0.9569 | pathogenic | 0.329 | Stabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/Q | 0.2001 | likely_benign | 0.2297 | benign | -0.812 | Destabilizing | 0.17 | N | 0.421 | neutral | N | 0.514209133 | None | None | I |
E/R | 0.4858 | ambiguous | 0.5384 | ambiguous | 0.028 | Stabilizing | 0.973 | D | 0.615 | neutral | None | None | None | None | I |
E/S | 0.3095 | likely_benign | 0.3642 | ambiguous | -1.345 | Destabilizing | 0.953 | D | 0.511 | neutral | None | None | None | None | I |
E/T | 0.273 | likely_benign | 0.3254 | benign | -0.983 | Destabilizing | 0.986 | D | 0.661 | neutral | None | None | None | None | I |
E/V | 0.2629 | likely_benign | 0.3231 | benign | 0.329 | Stabilizing | 0.991 | D | 0.665 | neutral | N | 0.476991098 | None | None | I |
E/W | 0.9471 | likely_pathogenic | 0.9532 | pathogenic | 0.706 | Stabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/Y | 0.7245 | likely_pathogenic | 0.7573 | pathogenic | 0.721 | Stabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.