Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21140 | 63643;63644;63645 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
N2AB | 19499 | 58720;58721;58722 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
N2A | 18572 | 55939;55940;55941 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
N2B | 12075 | 36448;36449;36450 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
Novex-1 | 12200 | 36823;36824;36825 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
Novex-2 | 12267 | 37024;37025;37026 | chr2:178587989;178587988;178587987 | chr2:179452716;179452715;179452714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs765307639 | None | 0.885 | D | 0.495 | 0.28 | 0.347659731818 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs765307639 | None | 0.885 | D | 0.495 | 0.28 | 0.347659731818 | gnomAD-4.0.0 | 1.86058E-06 | None | None | None | None | N | None | 1.33579E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.696E-06 | 0 | 0 |
E/Q | rs765307639 | -1.191 | 0.322 | N | 0.34 | 0.169 | 0.207176502487 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.66E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs765307639 | -1.191 | 0.322 | N | 0.34 | 0.169 | 0.207176502487 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs765307639 | -1.191 | 0.322 | N | 0.34 | 0.169 | 0.207176502487 | gnomAD-4.0.0 | 1.86058E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.73098E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1141 | likely_benign | 0.1255 | benign | -0.954 | Destabilizing | 0.939 | D | 0.533 | neutral | N | 0.473561285 | None | None | N |
E/C | 0.7274 | likely_pathogenic | 0.751 | pathogenic | -0.595 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.1806 | likely_benign | 0.174 | benign | -1.318 | Destabilizing | 0.939 | D | 0.483 | neutral | N | 0.520540459 | None | None | N |
E/F | 0.64 | likely_pathogenic | 0.6507 | pathogenic | -0.273 | Destabilizing | 0.986 | D | 0.812 | deleterious | None | None | None | None | N |
E/G | 0.1864 | likely_benign | 0.196 | benign | -1.367 | Destabilizing | 0.982 | D | 0.705 | prob.neutral | N | 0.477284268 | None | None | N |
E/H | 0.5049 | ambiguous | 0.5106 | ambiguous | -0.607 | Destabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | N |
E/I | 0.21 | likely_benign | 0.2256 | benign | 0.191 | Stabilizing | 0.973 | D | 0.769 | deleterious | None | None | None | None | N |
E/K | 0.2199 | likely_benign | 0.2217 | benign | -1.016 | Destabilizing | 0.885 | D | 0.495 | neutral | D | 0.522193898 | None | None | N |
E/L | 0.2163 | likely_benign | 0.2387 | benign | 0.191 | Stabilizing | 0.128 | N | 0.499 | neutral | None | None | None | None | N |
E/M | 0.2818 | likely_benign | 0.304 | benign | 0.742 | Stabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.2905 | likely_benign | 0.2965 | benign | -1.489 | Destabilizing | 0.986 | D | 0.624 | neutral | None | None | None | None | N |
E/P | 0.3162 | likely_benign | 0.3083 | benign | -0.17 | Destabilizing | 0.993 | D | 0.752 | deleterious | None | None | None | None | N |
E/Q | 0.1576 | likely_benign | 0.1648 | benign | -1.301 | Destabilizing | 0.322 | N | 0.34 | neutral | N | 0.513998489 | None | None | N |
E/R | 0.352 | ambiguous | 0.3472 | ambiguous | -0.699 | Destabilizing | 0.973 | D | 0.622 | neutral | None | None | None | None | N |
E/S | 0.2028 | likely_benign | 0.2064 | benign | -1.887 | Destabilizing | 0.953 | D | 0.523 | neutral | None | None | None | None | N |
E/T | 0.1689 | likely_benign | 0.1771 | benign | -1.542 | Destabilizing | 0.986 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/V | 0.1299 | likely_benign | 0.1445 | benign | -0.17 | Destabilizing | 0.885 | D | 0.654 | neutral | N | 0.485486523 | None | None | N |
E/W | 0.8253 | likely_pathogenic | 0.8156 | pathogenic | -0.052 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.5534 | ambiguous | 0.5466 | ambiguous | -0.04 | Destabilizing | 0.993 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.