Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21159 | 63700;63701;63702 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
N2AB | 19518 | 58777;58778;58779 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
N2A | 18591 | 55996;55997;55998 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
N2B | 12094 | 36505;36506;36507 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
Novex-1 | 12219 | 36880;36881;36882 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
Novex-2 | 12286 | 37081;37082;37083 | chr2:178587932;178587931;178587930 | chr2:179452659;179452658;179452657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | N | 0.89 | 0.454 | 0.544346501278 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | rs1218951803 | -1.187 | 0.429 | N | 0.347 | 0.113 | 0.230578612272 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.44E-06 | 0 |
L/V | rs1218951803 | -1.187 | 0.429 | N | 0.347 | 0.113 | 0.230578612272 | gnomAD-4.0.0 | 1.61256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4704 | ambiguous | 0.4493 | ambiguous | -2.149 | Highly Destabilizing | 0.987 | D | 0.642 | neutral | None | None | None | None | N |
L/C | 0.5984 | likely_pathogenic | 0.5939 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/D | 0.9115 | likely_pathogenic | 0.9029 | pathogenic | -2.138 | Highly Destabilizing | 0.999 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.6751 | likely_pathogenic | 0.6448 | pathogenic | -1.958 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
L/F | 0.2931 | likely_benign | 0.2885 | benign | -1.198 | Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
L/G | 0.6818 | likely_pathogenic | 0.6476 | pathogenic | -2.646 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/H | 0.5803 | likely_pathogenic | 0.5517 | ambiguous | -1.974 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/I | 0.1288 | likely_benign | 0.1301 | benign | -0.749 | Destabilizing | 0.966 | D | 0.633 | neutral | N | 0.463998451 | None | None | N |
L/K | 0.5641 | likely_pathogenic | 0.5202 | ambiguous | -1.703 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
L/M | 0.1333 | likely_benign | 0.1362 | benign | -0.639 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
L/N | 0.67 | likely_pathogenic | 0.648 | pathogenic | -1.885 | Destabilizing | 0.999 | D | 0.915 | deleterious | None | None | None | None | N |
L/P | 0.7285 | likely_pathogenic | 0.7048 | pathogenic | -1.193 | Destabilizing | 0.999 | D | 0.89 | deleterious | N | 0.432462036 | None | None | N |
L/Q | 0.3475 | ambiguous | 0.322 | benign | -1.811 | Destabilizing | 0.999 | D | 0.903 | deleterious | N | 0.458601722 | None | None | N |
L/R | 0.5052 | ambiguous | 0.4672 | ambiguous | -1.365 | Destabilizing | 0.999 | D | 0.874 | deleterious | N | 0.465096182 | None | None | N |
L/S | 0.629 | likely_pathogenic | 0.6039 | pathogenic | -2.56 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
L/T | 0.4315 | ambiguous | 0.4244 | ambiguous | -2.238 | Highly Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
L/V | 0.1506 | likely_benign | 0.152 | benign | -1.193 | Destabilizing | 0.429 | N | 0.347 | neutral | N | 0.418860807 | None | None | N |
L/W | 0.4582 | ambiguous | 0.4431 | ambiguous | -1.513 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/Y | 0.5809 | likely_pathogenic | 0.5741 | pathogenic | -1.208 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.