Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21185 | 63778;63779;63780 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
N2AB | 19544 | 58855;58856;58857 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
N2A | 18617 | 56074;56075;56076 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
N2B | 12120 | 36583;36584;36585 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
Novex-1 | 12245 | 36958;36959;36960 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
Novex-2 | 12312 | 37159;37160;37161 | chr2:178587756;178587755;178587754 | chr2:179452483;179452482;179452481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs794729473 | None | None | N | 0.093 | 0.126 | 0.132336055621 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 6.07533E-05 | 0 |
I/V | rs1329536424 | None | None | N | 0.086 | 0.11 | 0.46614307118 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1329536424 | None | None | N | 0.086 | 0.11 | 0.46614307118 | gnomAD-4.0.0 | 6.57601E-06 | None | None | None | None | I | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1381 | likely_benign | 0.155 | benign | -1.304 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | I |
I/C | 0.4633 | ambiguous | 0.5072 | ambiguous | -0.955 | Destabilizing | 0.132 | N | 0.278 | neutral | None | None | None | None | I |
I/D | 0.535 | ambiguous | 0.572 | pathogenic | -0.878 | Destabilizing | 0.002 | N | 0.271 | neutral | None | None | None | None | I |
I/E | 0.4218 | ambiguous | 0.4554 | ambiguous | -0.863 | Destabilizing | 0.004 | N | 0.254 | neutral | None | None | None | None | I |
I/F | 0.2012 | likely_benign | 0.2025 | benign | -0.788 | Destabilizing | 0.021 | N | 0.219 | neutral | None | None | None | None | I |
I/G | 0.471 | ambiguous | 0.5361 | ambiguous | -1.603 | Destabilizing | 0.002 | N | 0.255 | neutral | None | None | None | None | I |
I/H | 0.3147 | likely_benign | 0.3487 | ambiguous | -0.663 | Destabilizing | 0.132 | N | 0.411 | neutral | None | None | None | None | I |
I/K | 0.3189 | likely_benign | 0.3221 | benign | -1.05 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.458751 | None | None | I |
I/L | 0.1081 | likely_benign | 0.1159 | benign | -0.561 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.500888411 | None | None | I |
I/M | 0.0805 | likely_benign | 0.0869 | benign | -0.612 | Destabilizing | 0.016 | N | 0.308 | neutral | N | 0.506256945 | None | None | I |
I/N | 0.1326 | likely_benign | 0.1444 | benign | -1.012 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | I |
I/P | 0.4243 | ambiguous | 0.4981 | ambiguous | -0.778 | Destabilizing | 0.018 | N | 0.317 | neutral | None | None | None | None | I |
I/Q | 0.2811 | likely_benign | 0.3076 | benign | -1.128 | Destabilizing | 0.009 | N | 0.327 | neutral | None | None | None | None | I |
I/R | 0.2757 | likely_benign | 0.2639 | benign | -0.467 | Destabilizing | None | N | 0.154 | neutral | N | 0.48286001 | None | None | I |
I/S | 0.1278 | likely_benign | 0.137 | benign | -1.554 | Destabilizing | None | N | 0.106 | neutral | None | None | None | None | I |
I/T | 0.0585 | likely_benign | 0.0619 | benign | -1.42 | Destabilizing | None | N | 0.093 | neutral | N | 0.39050721 | None | None | I |
I/V | 0.0652 | likely_benign | 0.0711 | benign | -0.778 | Destabilizing | None | N | 0.086 | neutral | N | 0.415768227 | None | None | I |
I/W | 0.7461 | likely_pathogenic | 0.7592 | pathogenic | -0.873 | Destabilizing | 0.316 | N | 0.295 | neutral | None | None | None | None | I |
I/Y | 0.4081 | ambiguous | 0.3986 | ambiguous | -0.648 | Destabilizing | 0.041 | N | 0.369 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.