Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21196 | 63811;63812;63813 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
N2AB | 19555 | 58888;58889;58890 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
N2A | 18628 | 56107;56108;56109 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
N2B | 12131 | 36616;36617;36618 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
Novex-1 | 12256 | 36991;36992;36993 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
Novex-2 | 12323 | 37192;37193;37194 | chr2:178587723;178587722;178587721 | chr2:179452450;179452449;179452448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs1460483373 | None | 1.0 | N | 0.708 | 0.351 | 0.335164054921 | gnomAD-4.0.0 | 1.59346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78707E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6093 | likely_pathogenic | 0.6285 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/D | 0.9905 | likely_pathogenic | 0.9907 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.892 | deleterious | N | 0.487914606 | None | None | N |
A/E | 0.99 | likely_pathogenic | 0.9898 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
A/F | 0.956 | likely_pathogenic | 0.9579 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
A/G | 0.1514 | likely_benign | 0.2469 | benign | -1.029 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.491977273 | None | None | N |
A/H | 0.9895 | likely_pathogenic | 0.9898 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
A/I | 0.8416 | likely_pathogenic | 0.8229 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/K | 0.9956 | likely_pathogenic | 0.996 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
A/L | 0.7483 | likely_pathogenic | 0.7532 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
A/M | 0.857 | likely_pathogenic | 0.8555 | pathogenic | 0.288 | Stabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/N | 0.9709 | likely_pathogenic | 0.9722 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
A/P | 0.9621 | likely_pathogenic | 0.9609 | pathogenic | 0.081 | Stabilizing | 1.0 | D | 0.877 | deleterious | N | 0.487914606 | None | None | N |
A/Q | 0.9763 | likely_pathogenic | 0.9778 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/R | 0.9868 | likely_pathogenic | 0.9875 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/S | 0.2512 | likely_benign | 0.2576 | benign | -1.078 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.457782482 | None | None | N |
A/T | 0.4325 | ambiguous | 0.4181 | ambiguous | -0.799 | Destabilizing | 1.0 | D | 0.85 | deleterious | N | 0.457693577 | None | None | N |
A/V | 0.5483 | ambiguous | 0.4984 | ambiguous | 0.081 | Stabilizing | 1.0 | D | 0.768 | deleterious | N | 0.380497207 | None | None | N |
A/W | 0.9951 | likely_pathogenic | 0.9956 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
A/Y | 0.9828 | likely_pathogenic | 0.9829 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.