Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21211 | 63856;63857;63858 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
N2AB | 19570 | 58933;58934;58935 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
N2A | 18643 | 56152;56153;56154 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
N2B | 12146 | 36661;36662;36663 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
Novex-1 | 12271 | 37036;37037;37038 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
Novex-2 | 12338 | 37237;37238;37239 | chr2:178587678;178587677;178587676 | chr2:179452405;179452404;179452403 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs397517654 | None | 0.565 | N | 0.434 | 0.225 | 0.367042808489 | gnomAD-4.0.0 | 2.05364E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69916E-06 | 0 | 0 |
V/I | None | None | 0.034 | N | 0.347 | 0.036 | 0.26169431596 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1293 | likely_benign | 0.1255 | benign | -0.754 | Destabilizing | 0.565 | D | 0.434 | neutral | N | 0.385327024 | None | None | I |
V/C | 0.6819 | likely_pathogenic | 0.6834 | pathogenic | -0.853 | Destabilizing | 0.996 | D | 0.497 | neutral | None | None | None | None | I |
V/D | 0.3066 | likely_benign | 0.2472 | benign | -0.31 | Destabilizing | 0.983 | D | 0.622 | neutral | N | 0.31315192 | None | None | I |
V/E | 0.2539 | likely_benign | 0.2093 | benign | -0.355 | Destabilizing | 0.961 | D | 0.565 | neutral | None | None | None | None | I |
V/F | 0.2031 | likely_benign | 0.1889 | benign | -0.598 | Destabilizing | 0.901 | D | 0.464 | neutral | N | 0.488819538 | None | None | I |
V/G | 0.1971 | likely_benign | 0.1857 | benign | -0.974 | Destabilizing | 0.949 | D | 0.609 | neutral | N | 0.401216409 | None | None | I |
V/H | 0.5503 | ambiguous | 0.5266 | ambiguous | -0.362 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | I |
V/I | 0.0899 | likely_benign | 0.0936 | benign | -0.292 | Destabilizing | 0.034 | N | 0.347 | neutral | N | 0.478045184 | None | None | I |
V/K | 0.4308 | ambiguous | 0.3737 | ambiguous | -0.727 | Destabilizing | 0.923 | D | 0.563 | neutral | None | None | None | None | I |
V/L | 0.1932 | likely_benign | 0.183 | benign | -0.292 | Destabilizing | 0.156 | N | 0.391 | neutral | N | 0.406761088 | None | None | I |
V/M | 0.1271 | likely_benign | 0.1238 | benign | -0.482 | Destabilizing | 0.096 | N | 0.283 | neutral | None | None | None | None | I |
V/N | 0.2252 | likely_benign | 0.2099 | benign | -0.597 | Destabilizing | 0.961 | D | 0.632 | neutral | None | None | None | None | I |
V/P | 0.3376 | likely_benign | 0.3359 | benign | -0.41 | Destabilizing | 0.987 | D | 0.565 | neutral | None | None | None | None | I |
V/Q | 0.3261 | likely_benign | 0.2936 | benign | -0.74 | Destabilizing | 0.961 | D | 0.578 | neutral | None | None | None | None | I |
V/R | 0.4284 | ambiguous | 0.3588 | ambiguous | -0.241 | Destabilizing | 0.923 | D | 0.632 | neutral | None | None | None | None | I |
V/S | 0.1793 | likely_benign | 0.1732 | benign | -1.06 | Destabilizing | 0.923 | D | 0.495 | neutral | None | None | None | None | I |
V/T | 0.1244 | likely_benign | 0.1244 | benign | -0.991 | Destabilizing | 0.775 | D | 0.397 | neutral | None | None | None | None | I |
V/W | 0.7574 | likely_pathogenic | 0.732 | pathogenic | -0.715 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | I |
V/Y | 0.4926 | ambiguous | 0.48 | ambiguous | -0.426 | Destabilizing | 0.961 | D | 0.466 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.