Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21267 | 64024;64025;64026 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
N2AB | 19626 | 59101;59102;59103 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
N2A | 18699 | 56320;56321;56322 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
N2B | 12202 | 36829;36830;36831 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
Novex-1 | 12327 | 37204;37205;37206 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
Novex-2 | 12394 | 37405;37406;37407 | chr2:178587412;178587411;178587410 | chr2:179452139;179452138;179452137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs200365508 | -0.396 | 0.986 | D | 0.791 | 0.652 | None | gnomAD-2.1.1 | 1.11E-05 | None | None | None | None | N | None | 1.28899E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs200365508 | -0.396 | 0.986 | D | 0.791 | 0.652 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 2.17339E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs200365508 | -0.396 | 0.986 | D | 0.791 | 0.652 | None | gnomAD-4.0.0 | 8.70561E-06 | None | None | None | None | N | None | 1.87326E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8372 | likely_pathogenic | 0.8988 | pathogenic | -1.09 | Destabilizing | 0.952 | D | 0.701 | prob.delet. | D | 0.62423491 | None | None | N |
P/C | 0.9874 | likely_pathogenic | 0.9927 | pathogenic | -1.989 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/D | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -3.316 | Highly Destabilizing | 0.989 | D | 0.751 | deleterious | None | None | None | None | N |
P/E | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -3.267 | Highly Destabilizing | 0.989 | D | 0.752 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.86 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
P/G | 0.9935 | likely_pathogenic | 0.9962 | pathogenic | -1.353 | Destabilizing | 0.989 | D | 0.757 | deleterious | None | None | None | None | N |
P/H | 0.9983 | likely_pathogenic | 0.999 | pathogenic | -0.813 | Destabilizing | 0.246 | N | 0.54 | neutral | D | 0.666397795 | None | None | N |
P/I | 0.9928 | likely_pathogenic | 0.9957 | pathogenic | -0.435 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
P/K | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -1.289 | Destabilizing | 0.989 | D | 0.755 | deleterious | None | None | None | None | N |
P/L | 0.9753 | likely_pathogenic | 0.9851 | pathogenic | -0.435 | Destabilizing | 0.986 | D | 0.791 | deleterious | D | 0.634157269 | None | None | N |
P/M | 0.9958 | likely_pathogenic | 0.9976 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/N | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -1.712 | Destabilizing | 0.989 | D | 0.811 | deleterious | None | None | None | None | N |
P/Q | 0.9977 | likely_pathogenic | 0.9987 | pathogenic | -1.903 | Destabilizing | 0.989 | D | 0.836 | deleterious | None | None | None | None | N |
P/R | 0.9964 | likely_pathogenic | 0.9978 | pathogenic | -0.86 | Destabilizing | 0.986 | D | 0.811 | deleterious | D | 0.65017663 | None | None | N |
P/S | 0.9756 | likely_pathogenic | 0.9862 | pathogenic | -1.902 | Destabilizing | 0.986 | D | 0.741 | deleterious | D | 0.649974826 | None | None | N |
P/T | 0.973 | likely_pathogenic | 0.9841 | pathogenic | -1.761 | Destabilizing | 0.993 | D | 0.749 | deleterious | D | 0.666195991 | None | None | N |
P/V | 0.9707 | likely_pathogenic | 0.9823 | pathogenic | -0.627 | Destabilizing | 0.995 | D | 0.8 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
P/Y | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.795 | Destabilizing | 0.989 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.