Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21277 | 64054;64055;64056 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
N2AB | 19636 | 59131;59132;59133 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
N2A | 18709 | 56350;56351;56352 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
N2B | 12212 | 36859;36860;36861 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
Novex-1 | 12337 | 37234;37235;37236 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
Novex-2 | 12404 | 37435;37436;37437 | chr2:178587382;178587381;178587380 | chr2:179452109;179452108;179452107 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs2049253649 | None | 0.884 | N | 0.271 | 0.286 | 0.237489013734 | gnomAD-4.0.0 | 4.79721E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.01605E-04 | None | 0 | 0 | 2.70101E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1569 | likely_benign | 0.1895 | benign | -0.324 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.469874301 | None | None | N |
D/C | 0.5999 | likely_pathogenic | 0.6751 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/E | 0.1229 | likely_benign | 0.1499 | benign | -0.302 | Destabilizing | 0.996 | D | 0.401 | neutral | N | 0.489292045 | None | None | N |
D/F | 0.6055 | likely_pathogenic | 0.6841 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
D/G | 0.1778 | likely_benign | 0.1988 | benign | -0.543 | Destabilizing | 0.996 | D | 0.643 | neutral | D | 0.522271255 | None | None | N |
D/H | 0.2651 | likely_benign | 0.3204 | benign | -0.354 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.486741242 | None | None | N |
D/I | 0.417 | ambiguous | 0.5068 | ambiguous | 0.211 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/K | 0.368 | ambiguous | 0.4395 | ambiguous | -0.11 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/L | 0.3808 | ambiguous | 0.4484 | ambiguous | 0.211 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/M | 0.5479 | ambiguous | 0.6397 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
D/N | 0.0909 | likely_benign | 0.1027 | benign | -0.188 | Destabilizing | 0.884 | D | 0.271 | neutral | N | 0.515843928 | None | None | N |
D/P | 0.8077 | likely_pathogenic | 0.8363 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
D/Q | 0.2964 | likely_benign | 0.3579 | ambiguous | -0.141 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/R | 0.3945 | ambiguous | 0.4599 | ambiguous | 0.062 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/S | 0.1214 | likely_benign | 0.144 | benign | -0.372 | Destabilizing | 0.997 | D | 0.587 | neutral | None | None | None | None | N |
D/T | 0.2302 | likely_benign | 0.2883 | benign | -0.216 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/V | 0.2463 | likely_benign | 0.3055 | benign | 0.055 | Stabilizing | 1.0 | D | 0.769 | deleterious | N | 0.485473795 | None | None | N |
D/W | 0.883 | likely_pathogenic | 0.9123 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/Y | 0.2785 | likely_benign | 0.3275 | benign | -0.125 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.496945459 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.