Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21291 | 64096;64097;64098 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
N2AB | 19650 | 59173;59174;59175 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
N2A | 18723 | 56392;56393;56394 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
N2B | 12226 | 36901;36902;36903 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
Novex-1 | 12351 | 37276;37277;37278 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
Novex-2 | 12418 | 37477;37478;37479 | chr2:178587340;178587339;178587338 | chr2:179452067;179452066;179452065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.998 | N | 0.63 | 0.398 | 0.385578977469 | gnomAD-4.0.0 | 6.94381E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08772E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.122 | likely_benign | 0.1302 | benign | -0.128 | Destabilizing | 0.998 | D | 0.64 | neutral | N | 0.479192482 | None | None | N |
E/C | 0.7299 | likely_pathogenic | 0.7751 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/D | 0.0959 | likely_benign | 0.1209 | benign | -0.192 | Destabilizing | 0.434 | N | 0.219 | neutral | N | 0.45752913 | None | None | N |
E/F | 0.6878 | likely_pathogenic | 0.7376 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/G | 0.1439 | likely_benign | 0.1579 | benign | -0.273 | Destabilizing | 0.999 | D | 0.616 | neutral | N | 0.461532228 | None | None | N |
E/H | 0.3904 | ambiguous | 0.4287 | ambiguous | 0.159 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/I | 0.2296 | likely_benign | 0.2594 | benign | 0.2 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/K | 0.1439 | likely_benign | 0.1369 | benign | 0.543 | Stabilizing | 0.998 | D | 0.63 | neutral | N | 0.479307125 | None | None | N |
E/L | 0.2665 | likely_benign | 0.2925 | benign | 0.2 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/M | 0.3737 | ambiguous | 0.4137 | ambiguous | 0.205 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/N | 0.2057 | likely_benign | 0.2562 | benign | 0.327 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/P | 0.4244 | ambiguous | 0.4638 | ambiguous | 0.11 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Q | 0.1267 | likely_benign | 0.1275 | benign | 0.341 | Stabilizing | 0.999 | D | 0.657 | neutral | N | 0.506533799 | None | None | N |
E/R | 0.2489 | likely_benign | 0.2351 | benign | 0.661 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/S | 0.161 | likely_benign | 0.1861 | benign | 0.181 | Stabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | N |
E/T | 0.18 | likely_benign | 0.2084 | benign | 0.302 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/V | 0.1493 | likely_benign | 0.1653 | benign | 0.11 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.488025396 | None | None | N |
E/W | 0.8458 | likely_pathogenic | 0.8647 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.5477 | ambiguous | 0.5997 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.