Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21308 | 64147;64148;64149 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
N2AB | 19667 | 59224;59225;59226 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
N2A | 18740 | 56443;56444;56445 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
N2B | 12243 | 36952;36953;36954 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
Novex-1 | 12368 | 37327;37328;37329 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
Novex-2 | 12435 | 37528;37529;37530 | chr2:178587289;178587288;178587287 | chr2:179452016;179452015;179452014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs772717263 | None | 0.949 | N | 0.526 | 0.325 | 0.308904156042 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/E | rs772717263 | None | 0.949 | N | 0.526 | 0.325 | 0.308904156042 | gnomAD-4.0.0 | 4.06057E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.82002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.416 | ambiguous | 0.4316 | ambiguous | -0.712 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
A/D | 0.5097 | ambiguous | 0.4834 | ambiguous | -1.311 | Destabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | N |
A/E | 0.3905 | ambiguous | 0.3614 | ambiguous | -1.333 | Destabilizing | 0.949 | D | 0.526 | neutral | N | 0.434420197 | None | None | N |
A/F | 0.3887 | ambiguous | 0.3871 | ambiguous | -1.024 | Destabilizing | 0.923 | D | 0.644 | neutral | None | None | None | None | N |
A/G | 0.134 | likely_benign | 0.1318 | benign | -1.27 | Destabilizing | 0.84 | D | 0.537 | neutral | N | 0.44800557 | None | None | N |
A/H | 0.5702 | likely_pathogenic | 0.5539 | ambiguous | -1.421 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
A/I | 0.1503 | likely_benign | 0.161 | benign | -0.416 | Destabilizing | 0.372 | N | 0.511 | neutral | None | None | None | None | N |
A/K | 0.4594 | ambiguous | 0.4005 | ambiguous | -1.289 | Destabilizing | 0.961 | D | 0.525 | neutral | None | None | None | None | N |
A/L | 0.1527 | likely_benign | 0.1573 | benign | -0.416 | Destabilizing | 0.415 | N | 0.509 | neutral | None | None | None | None | N |
A/M | 0.1428 | likely_benign | 0.1545 | benign | -0.253 | Destabilizing | 0.923 | D | 0.595 | neutral | None | None | None | None | N |
A/N | 0.299 | likely_benign | 0.3095 | benign | -0.919 | Destabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | N |
A/P | 0.3517 | ambiguous | 0.3434 | ambiguous | -0.571 | Destabilizing | 0.983 | D | 0.579 | neutral | N | 0.435441705 | None | None | N |
A/Q | 0.3907 | ambiguous | 0.3726 | ambiguous | -1.082 | Destabilizing | 0.987 | D | 0.589 | neutral | None | None | None | None | N |
A/R | 0.4657 | ambiguous | 0.4099 | ambiguous | -0.897 | Destabilizing | 0.961 | D | 0.592 | neutral | None | None | None | None | N |
A/S | 0.1033 | likely_benign | 0.1033 | benign | -1.251 | Destabilizing | 0.722 | D | 0.557 | neutral | N | 0.392920292 | None | None | N |
A/T | 0.0857 | likely_benign | 0.09 | benign | -1.188 | Destabilizing | 0.722 | D | 0.537 | neutral | N | 0.423819202 | None | None | N |
A/V | 0.0865 | likely_benign | 0.0899 | benign | -0.571 | Destabilizing | 0.003 | N | 0.253 | neutral | N | 0.38953327 | None | None | N |
A/W | 0.7622 | likely_pathogenic | 0.7528 | pathogenic | -1.39 | Destabilizing | 0.996 | D | 0.674 | neutral | None | None | None | None | N |
A/Y | 0.5157 | ambiguous | 0.5164 | ambiguous | -1.007 | Destabilizing | 0.961 | D | 0.649 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.