Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21310 | 64153;64154;64155 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
N2AB | 19669 | 59230;59231;59232 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
N2A | 18742 | 56449;56450;56451 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
N2B | 12245 | 36958;36959;36960 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
Novex-1 | 12370 | 37333;37334;37335 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
Novex-2 | 12437 | 37534;37535;37536 | chr2:178587283;178587282;178587281 | chr2:179452010;179452009;179452008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.025 | N | 0.321 | 0.133 | 0.305730143919 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9244 | likely_pathogenic | 0.8536 | pathogenic | -0.562 | Destabilizing | 0.845 | D | 0.449 | neutral | None | None | None | None | N |
R/C | 0.547 | ambiguous | 0.3638 | ambiguous | -0.471 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
R/D | 0.98 | likely_pathogenic | 0.9537 | pathogenic | -0.074 | Destabilizing | 0.975 | D | 0.489 | neutral | None | None | None | None | N |
R/E | 0.8972 | likely_pathogenic | 0.8031 | pathogenic | 0.002 | Stabilizing | 0.845 | D | 0.401 | neutral | None | None | None | None | N |
R/F | 0.9402 | likely_pathogenic | 0.8949 | pathogenic | -0.676 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | N |
R/G | 0.7938 | likely_pathogenic | 0.6204 | pathogenic | -0.806 | Destabilizing | 0.892 | D | 0.388 | neutral | N | 0.484672872 | None | None | N |
R/H | 0.3311 | likely_benign | 0.2106 | benign | -1.177 | Destabilizing | 0.987 | D | 0.463 | neutral | None | None | None | None | N |
R/I | 0.8818 | likely_pathogenic | 0.8037 | pathogenic | 0.067 | Stabilizing | 0.983 | D | 0.593 | neutral | N | 0.497057136 | None | None | N |
R/K | 0.2658 | likely_benign | 0.1889 | benign | -0.572 | Destabilizing | 0.025 | N | 0.321 | neutral | N | 0.469647492 | None | None | N |
R/L | 0.7639 | likely_pathogenic | 0.6387 | pathogenic | 0.067 | Stabilizing | 0.916 | D | 0.388 | neutral | None | None | None | None | N |
R/M | 0.7929 | likely_pathogenic | 0.6743 | pathogenic | -0.129 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
R/N | 0.9551 | likely_pathogenic | 0.9126 | pathogenic | -0.015 | Destabilizing | 0.975 | D | 0.431 | neutral | None | None | None | None | N |
R/P | 0.9887 | likely_pathogenic | 0.9757 | pathogenic | -0.122 | Destabilizing | 0.987 | D | 0.496 | neutral | None | None | None | None | N |
R/Q | 0.3262 | likely_benign | 0.2105 | benign | -0.266 | Destabilizing | 0.975 | D | 0.446 | neutral | None | None | None | None | N |
R/S | 0.9454 | likely_pathogenic | 0.8854 | pathogenic | -0.675 | Destabilizing | 0.892 | D | 0.437 | neutral | N | 0.458179704 | None | None | N |
R/T | 0.8784 | likely_pathogenic | 0.7717 | pathogenic | -0.447 | Destabilizing | 0.967 | D | 0.444 | neutral | N | 0.470898286 | None | None | N |
R/V | 0.9068 | likely_pathogenic | 0.8368 | pathogenic | -0.122 | Destabilizing | 0.975 | D | 0.583 | neutral | None | None | None | None | N |
R/W | 0.5899 | likely_pathogenic | 0.4534 | ambiguous | -0.47 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
R/Y | 0.8742 | likely_pathogenic | 0.7842 | pathogenic | -0.125 | Destabilizing | 0.996 | D | 0.512 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.